Jatropha Genome Database
- JcCB0534201.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0534201.10 - phase: 2 /partial
(301 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268517285|gb|FM887171.1|FM887171 FM887171 Jatropha curcas emb... 597 e-171
gi|268522858|gb|FM896301.1|FM896301 FM896301 Jatropha curcas emb... 597 e-171
gi|268521202|gb|FM891921.1|FM891921 FM891921 Jatropha curcas emb... 561 e-160
gi|268517176|gb|FM893524.1|FM893524 FM893524 Jatropha curcas emb... 315 2e-86
gi|268526422|gb|FM895276.1|FM895276 FM895276 Jatropha curcas emb... 147 8e-36
>gi|268517285|gb|FM887171.1|FM887171 FM887171 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_000281,
mRNA sequence
Length = 447
Score = 597 bits (301), Expect = e-171
Identities = 301/301 (100%)
Strand = Plus / Plus
Query: 1 tgctcattacttgaaggatcgcctacgtgatgctgggattagtgcaatgttgaatgagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 36 tgctcattacttgaaggatcgcctacgtgatgctgggattagtgcaatgttgaatgagtt 95
Query: 61 gagcagtactgttgtgtttgagcggcctagagatgaggagtttgttcgtaggtggcaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 gagcagtactgttgtgtttgagcggcctagagatgaggagtttgttcgtaggtggcaact 155
Query: 121 agcttgccaaggaagtattgctcatgtggtggtgatgcccaatgtcactattgagaagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 agcttgccaaggaagtattgctcatgtggtggtgatgcccaatgtcactattgagaagct 215
Query: 181 ggataatttcttgaatgaattaattgagaagcgctcaacatggtaccaggatggacaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 ggataatttcttgaatgaattaattgagaagcgctcaacatggtaccaggatggacaact 275
Query: 241 tcagtctccttgtattgcaactgatgttgggagtgagaattgtgcttgtgctttgcataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tcagtctccttgtattgcaactgatgttgggagtgagaattgtgcttgtgctttgcataa 335
Query: 301 g 301
|
Sbjct: 336 g 336
>gi|268522858|gb|FM896301.1|FM896301 FM896301 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003493,
mRNA sequence
Length = 504
Score = 597 bits (301), Expect = e-171
Identities = 301/301 (100%)
Strand = Plus / Plus
Query: 1 tgctcattacttgaaggatcgcctacgtgatgctgggattagtgcaatgttgaatgagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tgctcattacttgaaggatcgcctacgtgatgctgggattagtgcaatgttgaatgagtt 259
Query: 61 gagcagtactgttgtgtttgagcggcctagagatgaggagtttgttcgtaggtggcaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gagcagtactgttgtgtttgagcggcctagagatgaggagtttgttcgtaggtggcaact 319
Query: 121 agcttgccaaggaagtattgctcatgtggtggtgatgcccaatgtcactattgagaagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agcttgccaaggaagtattgctcatgtggtggtgatgcccaatgtcactattgagaagct 379
Query: 181 ggataatttcttgaatgaattaattgagaagcgctcaacatggtaccaggatggacaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggataatttcttgaatgaattaattgagaagcgctcaacatggtaccaggatggacaact 439
Query: 241 tcagtctccttgtattgcaactgatgttgggagtgagaattgtgcttgtgctttgcataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tcagtctccttgtattgcaactgatgttgggagtgagaattgtgcttgtgctttgcataa 499
Query: 301 g 301
|
Sbjct: 500 g 500
>gi|268521202|gb|FM891921.1|FM891921 FM891921 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_002335,
mRNA sequence
Length = 443
Score = 561 bits (283), Expect = e-160
Identities = 300/303 (99%), Gaps = 2/303 (0%)
Strand = Plus / Minus
Query: 1 tgctcattacttgaaggatcgcctacgtgatgctgggattagtgcaatgttgaatg-agt 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 401 tgctcattacttgaaggatcgcctacgtgatgctgggattagtgcaatgttgaatgtagt 342
Query: 60 tgagcagtactgtt-gtgtttgagcggcctagagatgaggagtttgttcgtaggtggcaa 118
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tgagcagtactgtttgtgtttgagcggcctagagatgaggagtttgttcgtaggtggcaa 282
Query: 119 ctagcttgccaaggaagtattgctcatgtggtggtgatgcccaatgtcactattgagaag 178
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 281 ctagcttgccaaggaagtattgctcatgtgttggtgatgcccaatgtcactattgagaag 222
Query: 179 ctggataatttcttgaatgaattaattgagaagcgctcaacatggtaccaggatggacaa 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 ctggataatttcttgaatgaattaattgagaagcgctcaacatggtaccaggatggacaa 162
Query: 239 cttcagtctccttgtattgcaactgatgttgggagtgagaattgtgcttgtgctttgcat 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 cttcagtctccttgtattgcaactgatgttgggagtgagaattgtgcttgtgctttgcat 102
Query: 299 aag 301
|||
Sbjct: 101 aag 99
>gi|268517176|gb|FM893524.1|FM893524 FM893524 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_004369,
mRNA sequence
Length = 220
Score = 315 bits (159), Expect = 2e-86
Identities = 159/159 (100%)
Strand = Plus / Plus
Query: 1 tgctcattacttgaaggatcgcctacgtgatgctgggattagtgcaatgttgaatgagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tgctcattacttgaaggatcgcctacgtgatgctgggattagtgcaatgttgaatgagtt 121
Query: 61 gagcagtactgttgtgtttgagcggcctagagatgaggagtttgttcgtaggtggcaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gagcagtactgttgtgtttgagcggcctagagatgaggagtttgttcgtaggtggcaact 181
Query: 121 agcttgccaaggaagtattgctcatgtggtggtgatgcc 159
|||||||||||||||||||||||||||||||||||||||
Sbjct: 182 agcttgccaaggaagtattgctcatgtggtggtgatgcc 220
>gi|268526422|gb|FM895276.1|FM895276 FM895276 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002076,
mRNA sequence
Length = 533
Score = 147 bits (74), Expect = 8e-36
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 1 tgctcattacttgaaggatcgcctacgtgatgctgggattagtgcaatgttgaatgagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tgctcattacttgaaggatcgcctacgtgatgctgggattagtgcaatgttgaatgagtt 519
Query: 61 gagcagtactgttg 74
||||||||||||||
Sbjct: 520 gagcagtactgttg 533