Jatropha Genome Database
- JcCB0507301.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0507301.10 - phase: 0 /partial
(664 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268526429|gb|FM895283.1|FM895283 FM895283 Jatropha curcas emb... 858 0.0
gi|268519537|gb|FM888004.1|FM888004 FM888004 Jatropha curcas emb... 688 0.0
gi|268520648|gb|FM889406.1|FM889406 FM889406 Jatropha curcas emb... 62 9e-10
>gi|268526429|gb|FM895283.1|FM895283 FM895283 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002083,
mRNA sequence
Length = 504
Score = 858 bits (433), Expect = 0.0
Identities = 433/433 (100%)
Strand = Plus / Plus
Query: 1 atgggtgccggtggcagaatgtctgttcctccttcccccaagaagttggaagctgaggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atgggtgccggtggcagaatgtctgttcctccttcccccaagaagttggaagctgaggtc 131
Query: 61 ttgaaacgagttccatactcgaagccaccattcacacttggtcaggtcaagaaagctatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 ttgaaacgagttccatactcgaagccaccattcacacttggtcaggtcaagaaagctatc 191
Query: 121 ccacctcattgtttccagcgttctgttctccgctcattctcgtatgttgtttatgacctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ccacctcattgtttccagcgttctgttctccgctcattctcgtatgttgtttatgacctg 251
Query: 181 acccttgcctttatcttttattatgttgccaccaattacttccacctccttcctcaaccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 acccttgcctttatcttttattatgttgccaccaattacttccacctccttcctcaaccc 311
Query: 241 ctctcttatgtggcctggccaatttactggtccctccaaggctgtgtcctcactggcatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ctctcttatgtggcctggccaatttactggtccctccaaggctgtgtcctcactggcatt 371
Query: 301 tgggttatagcacatgagtgtgggcatcatgcctttagtgactatcaatggcttgatgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgggttatagcacatgagtgtgggcatcatgcctttagtgactatcaatggcttgatgac 431
Query: 361 atagttggccttctcctccattcctgtctccttgtcccttacttttcatggaaacatagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 atagttggccttctcctccattcctgtctccttgtcccttacttttcatggaaacatagc 491
Query: 421 caccgccgtcatc 433
|||||||||||||
Sbjct: 492 caccgccgtcatc 504
>gi|268519537|gb|FM888004.1|FM888004 FM888004 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001312,
mRNA sequence
Length = 347
Score = 688 bits (347), Expect = 0.0
Identities = 347/347 (100%)
Strand = Plus / Plus
Query: 105 ggtcaagaaagctatcccacctcattgtttccagcgttctgttctccgctcattctcgta 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtcaagaaagctatcccacctcattgtttccagcgttctgttctccgctcattctcgta 60
Query: 165 tgttgtttatgacctgacccttgcctttatcttttattatgttgccaccaattacttcca 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgttgtttatgacctgacccttgcctttatcttttattatgttgccaccaattacttcca 120
Query: 225 cctccttcctcaacccctctcttatgtggcctggccaatttactggtccctccaaggctg 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cctccttcctcaacccctctcttatgtggcctggccaatttactggtccctccaaggctg 180
Query: 285 tgtcctcactggcatttgggttatagcacatgagtgtgggcatcatgcctttagtgacta 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtcctcactggcatttgggttatagcacatgagtgtgggcatcatgcctttagtgacta 240
Query: 345 tcaatggcttgatgacatagttggccttctcctccattcctgtctccttgtcccttactt 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcaatggcttgatgacatagttggccttctcctccattcctgtctccttgtcccttactt 300
Query: 405 ttcatggaaacatagccaccgccgtcatcactctaacaccggttccc 451
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttcatggaaacatagccaccgccgtcatcactctaacaccggttccc 347
>gi|268520648|gb|FM889406.1|FM889406 FM889406 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003067,
mRNA sequence
Length = 497
Score = 61.9 bits (31), Expect = 9e-10
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 289 ctcactggcatttgggttatagcacatgagtgtgggcatcatgcctttagtgactatcaa 348
|||||||| ||||||| || || ||||| || || || ||||| |||||||||||||||
Sbjct: 387 ctcactggtgtttgggtcattgctcatgaatgcggccaccatgcttttagtgactatcaa 446
Query: 349 tggcttgatgacatagttggcct 371
||| ||||||||| ||||||||
Sbjct: 447 tgggttgatgacactgttggcct 469