Jatropha Genome Database

JcCB0493621.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0493621.10 - phase: 0 /partial
         (735 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268519686|gb|FM888153.1|FM888153 FM888153 Jatropha curcas emb...   222   4e-58

>gi|268519686|gb|FM888153.1|FM888153 FM888153 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001494,
           mRNA sequence
          Length = 585

 Score =  222 bits (112), Expect = 4e-58
 Identities = 112/112 (100%)
 Strand = Plus / Minus

                                                                       
Query: 602 aggatgttcacactgaactcattcaatatcgaagggctcagatgatcaagcgagggattc 661
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 aggatgttcacactgaactcattcaatatcgaagggctcagatgatcaagcgagggattc 53

                                                               
Query: 662 ttaatgaagagcttagtgtagattctcaattacgtagggaaaatgggtcgtg 713
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52  ttaatgaagagcttagtgtagattctcaattacgtagggaaaatgggtcgtg 1



 Score =  178 bits (90), Expect = 6e-45
 Identities = 93/94 (98%)
 Strand = Plus / Minus

                                                                       
Query: 511 aggttaagactgcggggccaacctttccttgcatttcaccctggtttggtgagggacaca 570
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 393 aggttaagactgcggggccaacctttccttgcatttcaacctggtttggtgagggacaca 334

                                             
Query: 571 ttggcctatcatggctgtgcggaacttttccagg 604
           ||||||||||||||||||||||||||||||||||
Sbjct: 333 ttggcctatcatggctgtgcggaacttttccagg 300