Jatropha Genome Database

JcCB0492761.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0492761.20 - phase: 0 /partial
         (165 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268520747|gb|FM889505.1|FM889505 FM889505 Jatropha curcas emb...   170   3e-43

>gi|268520747|gb|FM889505.1|FM889505 FM889505 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003181,
           mRNA sequence
          Length = 211

 Score =  170 bits (86), Expect = 3e-43
 Identities = 89/90 (98%)
 Strand = Plus / Plus

                                                                       
Query: 72  tgaagatttggtagcattgaggaagaagcttgctgccatagaatctccagaaatcgggcc 131
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tgaagatttggtagcattgaggaagaagcttgctgccatagaatctccagaaatcgggcc 60

                                         
Query: 132 gtcttctccagtcactgatgagctgagtct 161
           |||||||||| |||||||||||||||||||
Sbjct: 61  gtcttctccattcactgatgagctgagtct 90