Jatropha Genome Database

JcCB0479101.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0479101.10 + phase: 1 /pseudo/partial
         (731 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524773|gb|FM895471.1|FM895471 FM895471 Jatropha curcas emb...   311   6e-85

>gi|268524773|gb|FM895471.1|FM895471 FM895471 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002395,
           mRNA sequence
          Length = 581

 Score =  311 bits (157), Expect = 6e-85
 Identities = 157/157 (100%)
 Strand = Plus / Plus

                                                                       
Query: 522 aaattcgcaacagttctcagaatgggatcaatgtacctgatgcaaacttagtacaagtat 581
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54  aaattcgcaacagttctcagaatgggatcaatgtacctgatgcaaacttagtacaagtat 113

                                                                       
Query: 582 catcaactggtgatgtcctaaatttgatgaacattggccagaggaatcgttcagtgagtg 641
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 catcaactggtgatgtcctaaatttgatgaacattggccagaggaatcgttcagtgagtg 173

                                                
Query: 642 ctacagcaatgaacgaccggagtagtcgatctcatag 678
           |||||||||||||||||||||||||||||||||||||
Sbjct: 174 ctacagcaatgaacgaccggagtagtcgatctcatag 210