Jatropha Genome Database

JcCB0476701.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0476701.10 + phase: 0 /partial
         (477 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|262090849|gb|GT229207.1|GT229207 JC772 Jatropha seeds from fr...   504   e-143

>gi|262090849|gb|GT229207.1|GT229207 JC772 Jatropha seeds from
           fruits at three stages of maturation Jatropha curcas
           cDNA clone PL18SE.F08.scf 5', mRNA sequence
          Length = 306

 Score =  504 bits (254), Expect = e-143
 Identities = 285/290 (98%), Gaps = 4/290 (1%)
 Strand = Plus / Plus

                                                                       
Query: 90  gcttctttggcaagcagaatcaactggaaagttccagtatttcctttgtgttactggaga 149
           |||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||
Sbjct: 19  gcttctttggcaagcagaatca-ctggaaagttccagtatt-cctttgtgtgactggaga 76

                                                                       
Query: 150 tcactctactccagttgaatatggagatcatagttttgaaccagttccatttgcaatgtc 209
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77  tcactctactccagttgaatatggagatcatagttttgaaccagttccatttgcaatgtc 136

                                                                       
Query: 210 cccgctgcaagactttgtggctgcagtaggcggggagtccatcgtcatggc-aacttccc 268
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 137 cccgctgcaagactttgtggctgcagtaggcggggagtccatcgtcatggcaaacttccc 196

                                                                       
Query: 269 ttgaatcatttcctctacctacagttaaggctggtgaagacctaaaggacactaagacag 328
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ttgaatcatttcctctacctacagttaaggctggtgaagacctaaaggacactaagacag 256

                                                             
Query: 329 aaaaggaaagagctagcaaacagcttaaagc-tttcagcggcgattcagt 377
           ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 257 aaaaggaaagagctagcaaacagcttaaagcttttcagcggcgattcagt 306