Jatropha Genome Database

JcCB0473701.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0473701.10 + phase: 1 /partial
         (191 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268522074|gb|FM892914.1|FM892914 FM892914 Jatropha curcas emb...   379   e-106

>gi|268522074|gb|FM892914.1|FM892914 FM892914 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003620,
           mRNA sequence
          Length = 456

 Score =  379 bits (191), Expect = e-106
 Identities = 191/191 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   gtgcccgatgtgtagctactctattgcatgagatgaaacgccggggtagagattgtcgct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gtgcccgatgtgtagctactctattgcatgagatgaaacgccggggtagagattgtcgct 310

                                                                       
Query: 61  tcggagtggtgtcaatgtgcataggcacaggaatgggagcagctgctgtttttgagaggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tcggagtggtgtcaatgtgcataggcacaggaatgggagcagctgctgtttttgagaggg 250

                                                                       
Query: 121 gggatggctgtgatgagctgtgtaatgcccggaaagcagaaactgataagctgttatcaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gggatggctgtgatgagctgtgtaatgcccggaaagcagaaactgataagctgttatcaa 190

                      
Query: 181 aggatgctcta 191
           |||||||||||
Sbjct: 189 aggatgctcta 179