Jatropha Genome Database
- JcCB0467821.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0467821.10 - phase: 0 /partial
(1187 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268521959|gb|FM892799.1|FM892799 FM892799 Jatropha curcas emb... 468 e-132
gi|268523815|gb|FM890501.1|FM890501 FM890501 Jatropha curcas emb... 303 2e-82
gi|268523351|gb|FM891089.1|FM891089 FM891089 Jatropha curcas emb... 147 3e-35
gi|268519275|gb|FM887742.1|FM887742 FM887742 Jatropha curcas emb... 68 2e-11
>gi|268521959|gb|FM892799.1|FM892799 FM892799 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003449,
mRNA sequence
Length = 477
Score = 468 bits (236), Expect = e-132
Identities = 248/251 (98%), Gaps = 1/251 (0%)
Strand = Plus / Plus
Query: 807 taaaacatttaaaatgaagtttggccaccatggaggaaatcatccagttcgtaatgttcg 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 taaaacatttaaaatgaagtttggccaccatggaggaaatcatccagttcgtaatgttcg 62
Query: 867 gcaaaaccgtgttgagattagtgctcagaatcacaactacgcagttgacccagcatcact 926
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 63 gcaaaaccgtgttgagattagtgctcagaatcacaactacgcagttgacccagcat-nct 121
Query: 927 tcctgagggtgtggaagtgactcatatcaatctgaatgatggaagctgtgctggtcttgc 986
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 122 tcctgagggtgtggaagtgacttatatcaatctgaatgatggaagctgtgctggtcttgc 181
Query: 987 ttatccggcactaaacatcatgtcacttcaataccaccctgaggcatcccctggccctca 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ttatccggcactaaacatcatgtcacttcaataccaccctgaggcatcccctggccctca 241
Query: 1047 cgattcagata 1057
|||||||||||
Sbjct: 242 cgattcagata 252
>gi|268523815|gb|FM890501.1|FM890501 FM890501 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000171,
mRNA sequence
Length = 471
Score = 303 bits (153), Expect = 2e-82
Identities = 159/161 (98%)
Strand = Plus / Plus
Query: 900 caactacgcagttgacccagcatcacttcctgagggtgtggaagtgactcatatcaatct 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 caactacgcagttgacccagcatcacttcctgagggtgtggaagtgactcatatcaatct 64
Query: 960 gaatgatggaagctgtgctggtcttgcttatccggcactaaacatcatgtcacttcaata 1019
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 65 gaatgatggaagctgtgctggtcttgcttatcctccactaaacatcatgtcacttcaata 124
Query: 1020 ccaccctgaggcatcccctggccctcacgattcagatatgg 1060
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ccaccctgaggcatcccctggccctcacgattcagatatgg 165
>gi|268523351|gb|FM891089.1|FM891089 FM891089 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_001088,
mRNA sequence
Length = 425
Score = 147 bits (74), Expect = 3e-35
Identities = 74/74 (100%)
Strand = Plus / Minus
Query: 984 tgcttatccggcactaaacatcatgtcacttcaataccaccctgaggcatcccctggccc 1043
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tgcttatccggcactaaacatcatgtcacttcaataccaccctgaggcatcccctggccc 351
Query: 1044 tcacgattcagata 1057
||||||||||||||
Sbjct: 350 tcacgattcagata 337
>gi|268519275|gb|FM887742.1|FM887742 FM887742 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001003,
mRNA sequence
Length = 507
Score = 67.9 bits (34), Expect = 2e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 1024 cctgaggcatcccctggccctcacgattcagata 1057
||||||||||||||||||||||||||||||||||
Sbjct: 54 cctgaggcatcccctggccctcacgattcagata 87