Jatropha Genome Database

JcCB0456151.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0456151.10 + phase: 1 /partial/short
         (121 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268519582|gb|FM888049.1|FM888049 FM888049 Jatropha curcas emb...   188   9e-49
gi|268517360|gb|FM887302.1|FM887302 FM887302 Jatropha curcas emb...    52   1e-07

>gi|268519582|gb|FM888049.1|FM888049 FM888049 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001365,
           mRNA sequence
          Length = 599

 Score =  188 bits (95), Expect = 9e-49
 Identities = 95/95 (100%)
 Strand = Plus / Plus

                                                                       
Query: 27  cctcaaattcaaaagcaagccaagctacaacttccaagggaactacggaacaatcaaagc 86
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 cctcaaattcaaaagcaagccaagctacaacttccaagggaactacggaacaatcaaagc 395

                                              
Query: 87  cttcatccaagtcatcaaggaagaagtccaggaat 121
           |||||||||||||||||||||||||||||||||||
Sbjct: 396 cttcatccaagtcatcaaggaagaagtccaggaat 430


>gi|268517360|gb|FM887302.1|FM887302 FM887302 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_000467,
           mRNA sequence
          Length = 685

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 1   ttctccatgcgaataagatggaccag 26
           ||||||||||||||||||||||||||
Sbjct: 164 ttctccatgcgaataagatggaccag 189