Jatropha Genome Database
- JcCB0455701.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0455701.10 + phase: 0
(441 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268524156|gb|FM894835.1|FM894835 FM894835 Jatropha curcas emb... 365 e-101
gi|218687254|gb|GH296534.1|GH296534 JCL984 Jatropha curcas total... 54 1e-07
gi|218687339|gb|GH295993.1|GH295993 JCL442 Jatropha curcas total... 54 1e-07
gi|218687552|gb|GH295599.1|GH295599 JCL48 Jatropha curcas total ... 54 1e-07
gi|237680575|gb|GO246787.1|GO246787 JcrME_RL0331 Expressed seque... 54 1e-07
gi|268517803|gb|FM893178.1|FM893178 FM893178 Jatropha curcas emb... 54 1e-07
gi|268522290|gb|FM894435.1|FM894435 FM894435 Jatropha curcas emb... 54 1e-07
gi|268525143|gb|FM895785.1|FM895785 FM895785 Jatropha curcas emb... 54 1e-07
gi|268521500|gb|FM894252.1|FM894252 FM894252 Jatropha curcas emb... 50 2e-06
>gi|268524156|gb|FM894835.1|FM894835 FM894835 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000721,
mRNA sequence
Length = 602
Score = 365 bits (184), Expect = e-101
Identities = 184/184 (100%)
Strand = Plus / Plus
Query: 230 gtggatttacggattcaaattacacccagttgactgagctttataaaaagtacaaggacc 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 gtggatttacggattcaaattacacccagttgactgagctttataaaaagtacaaggacc 281
Query: 290 aaggtcttgaaatcttggcttttccatgcaatcaatttctaaaacaagagcctgggtcaa 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 aaggtcttgaaatcttggcttttccatgcaatcaatttctaaaacaagagcctgggtcaa 341
Query: 350 gtgaaaatgcgcaagagtttgcttgtacacgatacaaggctgaatacccaatcttccaaa 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gtgaaaatgcgcaagagtttgcttgtacacgatacaaggctgaatacccaatcttccaaa 401
Query: 410 aggt 413
||||
Sbjct: 402 aggt 405
Score = 260 bits (131), Expect = 1e-69
Identities = 131/131 (100%)
Strand = Plus / Plus
Query: 1 atgggcggttctgcatctgtccctgagaaatcaatccatgaattcactgtcaaggatgcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92 atgggcggttctgcatctgtccctgagaaatcaatccatgaattcactgtcaaggatgcg 151
Query: 61 cgaggccaggaagtcgacctcagcgtctacaaagggaaggttctccttgtcgtcaatgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 cgaggccaggaagtcgacctcagcgtctacaaagggaaggttctccttgtcgtcaatgtc 211
Query: 121 gcctctaaatg 131
|||||||||||
Sbjct: 212 gcctctaaatg 222
>gi|218687254|gb|GH296534.1|GH296534 JCL984 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 844
Score = 54.0 bits (27), Expect = 1e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 277 aagtacaaggaccaaggtcttgaaatcttggcttttccatgcaatcaattt 327
||||||||||| |||||| | || || |||||||||||||||||||||||
Sbjct: 351 aagtacaaggatcaaggtttggagattctggcttttccatgcaatcaattt 401
>gi|218687339|gb|GH295993.1|GH295993 JCL442 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 844
Score = 54.0 bits (27), Expect = 1e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 277 aagtacaaggaccaaggtcttgaaatcttggcttttccatgcaatcaattt 327
||||||||||| |||||| | || || |||||||||||||||||||||||
Sbjct: 351 aagtacaaggatcaaggtttggagattctggcttttccatgcaatcaattt 401
>gi|218687552|gb|GH295599.1|GH295599 JCL48 Jatropha curcas total
leaf library Jatropha curcas cDNA, mRNA sequence
Length = 844
Score = 54.0 bits (27), Expect = 1e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 277 aagtacaaggaccaaggtcttgaaatcttggcttttccatgcaatcaattt 327
||||||||||| |||||| | || || |||||||||||||||||||||||
Sbjct: 351 aagtacaaggatcaaggtttggagattctggcttttccatgcaatcaattt 401
>gi|237680575|gb|GO246787.1|GO246787 JcrME_RL0331 Expressed sequence
tags from Jatropha curcas root cDNA library Jatropha
curcas cDNA, mRNA sequence
Length = 700
Score = 54.0 bits (27), Expect = 1e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 277 aagtacaaggaccaaggtcttgaaatcttggcttttccatgcaatcaattt 327
||||||||||| |||||| | || || |||||||||||||||||||||||
Sbjct: 390 aagtacaaggatcaaggtttggagattctggcttttccatgcaatcaattt 440
>gi|268517803|gb|FM893178.1|FM893178 FM893178 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb1_003910,
mRNA sequence
Length = 612
Score = 54.0 bits (27), Expect = 1e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 277 aagtacaaggaccaaggtcttgaaatcttggcttttccatgcaatcaattt 327
||||||||||| |||||| | || || |||||||||||||||||||||||
Sbjct: 495 aagtacaaggatcaaggtttggagattctggcttttccatgcaatcaattt 445
>gi|268522290|gb|FM894435.1|FM894435 FM894435 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004787,
mRNA sequence
Length = 640
Score = 54.0 bits (27), Expect = 1e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 277 aagtacaaggaccaaggtcttgaaatcttggcttttccatgcaatcaattt 327
||||||||||| |||||| | || || |||||||||||||||||||||||
Sbjct: 366 aagtacaaggatcaaggtttggagattctggcttttccatgcaatcaattt 416
>gi|268525143|gb|FM895785.1|FM895785 FM895785 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002771,
mRNA sequence
Length = 650
Score = 54.0 bits (27), Expect = 1e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 277 aagtacaaggaccaaggtcttgaaatcttggcttttccatgcaatcaattt 327
||||||||||| |||||| | || || |||||||||||||||||||||||
Sbjct: 366 aagtacaaggatcaaggtttggagattctggcttttccatgcaatcaattt 416
>gi|268521500|gb|FM894252.1|FM894252 FM894252 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004557,
mRNA sequence
Length = 670
Score = 50.1 bits (25), Expect = 2e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 277 aagtacaaggaccaaggtcttgaaatcttggcttttccatgcaatcaat 325
||||||||||| |||||| | || || |||||||||||||||||||||
Sbjct: 543 aagtacaaggatcaaggtttggagattctggcttttccatgcaatcaat 495