Jatropha Genome Database

JcCB0453091.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0453091.10 + phase: 0 
         (183 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268525649|gb|FM890904.1|FM890904 FM890904 Jatropha curcas emb...   353   4e-98
gi|268524432|gb|FM895112.1|FM895112 FM895112 Jatropha curcas emb...   258   2e-69
gi|268523834|gb|FM890520.1|FM890520 FM890520 Jatropha curcas emb...   121   3e-28

>gi|268525649|gb|FM890904.1|FM890904 FM890904 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000863,
           mRNA sequence
          Length = 525

 Score =  353 bits (178), Expect = 4e-98
 Identities = 178/178 (100%)
 Strand = Plus / Minus

                                                                       
Query: 6   ggacccattggtaactaaaggaccaactttagttcctttgcttggcattgatgtttggga 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ggacccattggtaactaaaggaccaactttagttcctttgcttggcattgatgtttggga 394

                                                                       
Query: 66  gcatgcatactacttacagtacaagaatgtcagacctgattatctaaagaacatatggaa 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gcatgcatactacttacagtacaagaatgtcagacctgattatctaaagaacatatggaa 334

                                                                     
Query: 126 ggtaataaattggaagtatgcaagtgaagtgtatgcaaatgaatgcccttcagcttag 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ggtaataaattggaagtatgcaagtgaagtgtatgcaaatgaatgcccttcagcttag 276


>gi|268524432|gb|FM895112.1|FM895112 FM895112 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_001684,
           mRNA sequence
          Length = 460

 Score =  258 bits (130), Expect = 2e-69
 Identities = 130/130 (100%)
 Strand = Plus / Plus

                                                                       
Query: 6   ggacccattggtaactaaaggaccaactttagttcctttgcttggcattgatgtttggga 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ggacccattggtaactaaaggaccaactttagttcctttgcttggcattgatgtttggga 390

                                                                       
Query: 66  gcatgcatactacttacagtacaagaatgtcagacctgattatctaaagaacatatggaa 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gcatgcatactacttacagtacaagaatgtcagacctgattatctaaagaacatatggaa 450

                     
Query: 126 ggtaataaat 135
           ||||||||||
Sbjct: 451 ggtaataaat 460


>gi|268523834|gb|FM890520.1|FM890520 FM890520 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_000192,
           mRNA sequence
          Length = 366

 Score =  121 bits (61), Expect = 3e-28
 Identities = 61/61 (100%)
 Strand = Plus / Plus

                                                                       
Query: 123 gaaggtaataaattggaagtatgcaagtgaagtgtatgcaaatgaatgcccttcagctta 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4   gaaggtaataaattggaagtatgcaagtgaagtgtatgcaaatgaatgcccttcagctta 63

            
Query: 183 g 183
           |
Sbjct: 64  g 64