Jatropha Genome Database

JcCB0437881.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0437881.10 - phase: 0 /TE
         (1749 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268516522|gb|FM889682.1|FM889682 FM889682 Jatropha curcas emb...    96   2e-19

>gi|268516522|gb|FM889682.1|FM889682 FM889682 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003394,
           mRNA sequence
          Length = 139

 Score = 95.6 bits (48), Expect = 2e-19
 Identities = 96/112 (85%)
 Strand = Plus / Minus

                                                                       
Query: 667 gatgagggagaagctcaaaccatcatggattccttacataatggggagtctggtccacac 726
           ||||| || |||||||||||||| |||||||||||||| |  |||||||| |||||||||
Sbjct: 114 gatgaaggggaagctcaaaccattatggattccttacacatcggggagtccggtccacac 55

                                                               
Query: 727 atgcacgggatagccttggctcggaaaatcgtaaacctgggttattactggt 778
           ||||||||||||||  | ||||  |||||  | || ||||||||||||||||
Sbjct: 54  atgcacgggatagctctagctcaaaaaattatgaatctgggttattactggt 3