Jatropha Genome Database

JcCB0429731.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0429731.20 - phase: 0 
         (543 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|237680320|gb|GO246532.1|GO246532 JcrME_RL0076 Expressed seque...   753   0.0  

>gi|237680320|gb|GO246532.1|GO246532 JcrME_RL0076 Expressed sequence
           tags from Jatropha curcas root cDNA library Jatropha
           curcas cDNA, mRNA sequence
          Length = 658

 Score =  753 bits (380), Expect = 0.0
 Identities = 407/412 (98%), Gaps = 3/412 (0%)
 Strand = Plus / Plus

                                                                       
Query: 24  cacttatgttcttgctcttaaagacttccctggcacccacgaattccttcttctcgatga 83
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 56  cacttatgttcttgctcttaaaggcttccctggcacccacgaattccttcttctcgatga 115

                                                                       
Query: 84  cggaaaatggcaacatgttaaagagacaactgagattggtgaaggaaaactattctctcc 143
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 cggaaaatggcaacatgttaaagagacaactgagattggtgaaggaaaactattctctcc 175

                                                                       
Query: 144 aggaaatttaagagctacatctgacaatcctgactatgacaagttgatccactactatgt 203
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 aggaaatttaagagctacatctgacaatcctgactatgacaagttgatccactactatgt 235

                                                                       
Query: 204 gagagaaaaatacactttgagatacactggaggaatggtgccagatgttaatcagatcat 263
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 236 gagagaaaaatacactttgagatacactggaggaatggtgccagacgttaatcagatcat 295

                                                                       
Query: 264 tgtaaaagagaaaggtatcttcaccaatgtgatatcaccatcttcaaaggctaaactgag 323
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 296 tgtaaaagagaaaggtatcttcaccaatgtgatatcaccatcttc-aaggctaaactgag 354

                                                                       
Query: 324 attgttgtttgaggtagctccattaggattcctgatagagaaagctggaggctatagtag 383
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 attgttgtttgaggtagctccattaggattcctgatagagaaagctggaggctatagtag 414

                                                               
Query: 384 tgatggccatatctctgtgttagacaaggagatcaaaaatctcgatgacaga 435
           ||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 415 tgatggccatatctctgtgttagac-aggagatc-aaaatctcgatgacaga 464