Jatropha Genome Database

JcCB0396881.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0396881.10 + phase: 0 /pseudo/partial
         (281 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268521314|gb|FM892033.1|FM892033 FM892033 Jatropha curcas emb...   500   e-142
gi|268516956|gb|FM892508.1|FM892508 FM892508 Jatropha curcas emb...   492   e-139

>gi|268521314|gb|FM892033.1|FM892033 FM892033 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_002490,
           mRNA sequence
          Length = 506

 Score =  500 bits (252), Expect = e-142
 Identities = 252/252 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggtgatcgctcttccggccaacgtgaaaatgaagaagaggaagaggagaaggagccttca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53  ggtgatcgctcttccggccaacgtgaaaatgaagaagaggaagaggagaaggagccttca 112

                                                                       
Query: 61  agtgaaagcaccagccacgggtaccatatggttagaggaaaaatggggcatggaatggaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 agtgaaagcaccagccacgggtaccatatggttagaggaaaaatggggcatggaatggaa 172

                                                                       
Query: 121 gattatttagtggcagaaagtagagaaatcaatggttacaggttagggctatatgcaatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 gattatttagtggcagaaagtagagaaatcaatggttacaggttagggctatatgcaatt 232

                                                                       
Query: 181 tttgatggccactctggtcttgatgttgccaaatacttgcaatcccacctattcgataac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 tttgatggccactctggtcttgatgttgccaaatacttgcaatcccacctattcgataac 292

                       
Query: 241 ttattgaacgag 252
           ||||||||||||
Sbjct: 293 ttattgaacgag 304


>gi|268516956|gb|FM892508.1|FM892508 FM892508 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003074,
           mRNA sequence
          Length = 514

 Score =  492 bits (248), Expect = e-139
 Identities = 251/252 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggtgatcgctcttccggccaacgtgaaaatgaagaagaggaagaggagaaggagccttca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 ggtgatcgctcttccggccaacgtgaaaatgaagaagaggaagaggagaaggagccttca 175

                                                                       
Query: 61  agtgaaagcaccagccacgggtaccatatggttagaggaaaaatggggcatggaatggaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 agtgaaagcaccagccacgggtaccatatggttagaggaaaaatggggcatggaatggaa 235

                                                                       
Query: 121 gattatttagtggcagaaagtagagaaatcaatggttacaggttagggctatatgcaatt 180
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 236 gattatttagtggcagaaagtagagaaatcaatggttacaggttaaggctatatgcaatt 295

                                                                       
Query: 181 tttgatggccactctggtcttgatgttgccaaatacttgcaatcccacctattcgataac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 tttgatggccactctggtcttgatgttgccaaatacttgcaatcccacctattcgataac 355

                       
Query: 241 ttattgaacgag 252
           ||||||||||||
Sbjct: 356 ttattgaacgag 367