Jatropha Genome Database
- JcCB0375591.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0375591.10 + phase: 0 /pseudo
(1472 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|262091167|gb|GT228594.1|GT228594 JC159 Jatropha seeds from fr... 214 2e-55
gi|268521718|gb|FM894314.1|FM894314 FM894314 Jatropha curcas emb... 54 5e-07
gi|268523129|gb|FM894712.1|FM894712 FM894712 Jatropha curcas emb... 54 5e-07
gi|268523140|gb|FM894723.1|FM894723 FM894723 Jatropha curcas emb... 54 5e-07
>gi|262091167|gb|GT228594.1|GT228594 JC159 Jatropha seeds from fruits
at three stages of maturation Jatropha curcas cDNA clone
PL01SE.A01.scf 5', mRNA sequence
Length = 580
Score = 214 bits (108), Expect = 2e-55
Identities = 111/112 (99%)
Strand = Plus / Plus
Query: 1349 ggaagaagtttgatgaaaagtaccatttctcatgccagtttacagctgatctttttgcca 1408
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 34 ggaagaagtttgatgaaaagtaccatttctcatgtcagtttacagctgatctttttgcca 93
Query: 1409 tgaatcatacagatttcatcatcaccagtacattccaagaaattgctggaag 1460
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 tgaatcatacagatttcatcatcaccagtacattccaagaaattgctggaag 145
>gi|268521718|gb|FM894314.1|FM894314 FM894314 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004634,
mRNA sequence
Length = 551
Score = 54.0 bits (27), Expect = 5e-07
Identities = 78/95 (82%)
Strand = Plus / Plus
Query: 1366 aagtaccatttctcatgccagtttacagctgatctttttgccatgaatcatacagatttc 1425
||||||||||| || | |||||||||||||||||| |||| ||||| || |||||||
Sbjct: 227 aagtaccattttgcaagtcagtttacagctgatcttattgcaatgaacaatgcagatttt 286
Query: 1426 atcatcaccagtacattccaagaaattgctggaag 1460
|| ||||| ||||| | ||| || ||||| |||||
Sbjct: 287 attatcactagtacgtaccaggagattgcaggaag 321
>gi|268523129|gb|FM894712.1|FM894712 FM894712 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000549,
mRNA sequence
Length = 275
Score = 54.0 bits (27), Expect = 5e-07
Identities = 78/95 (82%)
Strand = Plus / Plus
Query: 1366 aagtaccatttctcatgccagtttacagctgatctttttgccatgaatcatacagatttc 1425
||||||||||| || | |||||||||||||||||| |||| ||||| || |||||||
Sbjct: 132 aagtaccattttgcaagtcagtttacagctgatcttattgcaatgaacaatgcagatttt 191
Query: 1426 atcatcaccagtacattccaagaaattgctggaag 1460
|| ||||| ||||| | ||| || ||||| |||||
Sbjct: 192 attatcactagtacgtaccaggagattgcaggaag 226
>gi|268523140|gb|FM894723.1|FM894723 FM894723 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000567,
mRNA sequence
Length = 605
Score = 54.0 bits (27), Expect = 5e-07
Identities = 78/95 (82%)
Strand = Plus / Plus
Query: 1366 aagtaccatttctcatgccagtttacagctgatctttttgccatgaatcatacagatttc 1425
||||||||||| || | |||||||||||||||||| |||| ||||| || |||||||
Sbjct: 20 aagtaccattttgcaagtcagtttacagctgatcttattgcaatgaacaatgcagatttt 79
Query: 1426 atcatcaccagtacattccaagaaattgctggaag 1460
|| ||||| ||||| | ||| || ||||| |||||
Sbjct: 80 attatcactagtacgtaccaggagattgcaggaag 114