Jatropha Genome Database
- JcCB0368641.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0368641.10 - phase: 1 /partial
(1268 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268521365|gb|FM894117.1|FM894117 FM894117 Jatropha curcas emb... 821 0.0
gi|262090848|gb|GT229206.1|GT229206 JC771 Jatropha seeds from fr... 607 e-173
>gi|268521365|gb|FM894117.1|FM894117 FM894117 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004301,
mRNA sequence
Length = 644
Score = 821 bits (414), Expect = 0.0
Identities = 428/435 (98%)
Strand = Plus / Plus
Query: 834 cctaaaattgtaaccattgttgaacaagaagcaaaccacaacggtccggnnnnnnnagac 893
||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 4 cctaaaattgtaaccattgttgaacaagaagcaaaccacaacggtccggtttttttagac 63
Query: 894 cggtttactgaagcgttgcattactattcgagtttgtttgactcgttggaaggatctggg 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 cggtttactgaagcgttgcattactattcgagtttgtttgactcgttggaaggatctggg 123
Query: 954 tcagttgtaccgagtcaagacctggttatgtccgagttatacttaggaaggcagatttgt 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tcagttgtaccgagtcaagacctggttatgtccgagttatacttaggaaggcagatttgt 183
Query: 1014 aatgttgtagcttgggaaggagcagaccgagttgagcgacatgagacgcttgctcagtgg 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 aatgttgtagcttgggaaggagcagaccgagttgagcgacatgagacgcttgctcagtgg 243
Query: 1074 agaactcggattgatgcagctgggttcgaaccggttcaccttggttcaaacgcgtataaa 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 agaactcggattgatgcagctgggttcgaaccggttcaccttggttcaaacgcgtataaa 303
Query: 1134 caagctggcatgttgttagatatattcgctggtggtgatgggtatagagtagaggaaaaa 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 caagctggcatgttgttagatatattcgctggtggtgatgggtatagagtagaggaaaaa 363
Query: 1194 gatggatgcttgatgcttggttggcatacgagaccgctaattgtcacctcggcttggaaa 1253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gatggatgcttgatgcttggttggcatacgagaccgctaattgtcacctcggcttggaaa 423
Query: 1254 cccggcggttcgagt 1268
|||||||||||||||
Sbjct: 424 cccggcggttcgagt 438
>gi|262090848|gb|GT229206.1|GT229206 JC771 Jatropha seeds from fruits
at three stages of maturation Jatropha curcas cDNA clone
PL18SE.D09.scf 5', mRNA sequence
Length = 360
Score = 607 bits (306), Expect = e-173
Identities = 340/351 (96%), Gaps = 2/351 (0%)
Strand = Plus / Plus
Query: 792 ggtgggattgataaagttctttcctctgttaaagcaatgaagcctaaaattgtaaccatt 851
||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 11 ggtgggattgataaagt-ctttcctctgttaaagcaatgaagcctaaaattgtagccatt 69
Query: 852 gttgaacaagaagcaaaccacaacggtccggnnnnnnnagaccggtttactgaagcgttg 911
||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 70 gttgaacaagaagcaaaccacaacggtccggtttttttagaccggtttactgaagcgttg 129
Query: 912 cattactattcgagtttgtttgactcgttggaaggatctgggtcagttgtaccgagtcaa 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 cattactattcgagtttgtttgactcgttggaaggatctgggtcagttgtaccgagtcaa 189
Query: 972 gacctggttatgtccgagttatacttaggaaggcagatttgtaatgttgtagcttgggaa 1031
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 190 gacctggttatgtccgagttatagttaggaaggcagatttgtaatgttgtagcttgggaa 249
Query: 1032 ggagcagaccgagttgagcgacatgagacgc-ttgctcagtggagaactcggattgatgc 1090
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 250 ggagcagaccgagttgagcgacatgagacgctttgctcagtggagaactcggattgatgc 309
Query: 1091 agctgggttcgaaccggttcaccttggttcaaacgcgtataaacaagctgg 1141
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 agctgggttcgaaccggttcaccttggttcaaacgcgtataaacaagctgg 360