Jatropha Genome Database
- JcCB0367281.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0367281.10 - phase: 0 /pseudo/partial
(360 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|237680357|gb|GO246508.1|GO246508 JcrME_RL0052 Expressed seque... 599 e-172
gi|237680363|gb|GO246514.1|GO246514 JcrME_RL0058 Expressed seque... 599 e-172
>gi|237680357|gb|GO246508.1|GO246508 JcrME_RL0052 Expressed sequence
tags from Jatropha curcas root cDNA library Jatropha
curcas cDNA, mRNA sequence
Length = 739
Score = 599 bits (302), Expect = e-172
Identities = 302/302 (100%)
Strand = Plus / Plus
Query: 1 atgtcactctccttgcaatctccgcccttttctgctctttactccaaatcatttcttcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 atgtcactctccttgcaatctccgcccttttctgctctttactccaaatcatttcttcag 211
Query: 61 aatggagggaacttgaggctgctaggtggatcgggagcttcaaatgcaatcttcttcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 aatggagggaacttgaggctgctaggtggatcgggagcttcaaatgcaatcttcttcaag 271
Query: 121 ttacaacggtcttttccacaaattcgtgcttcttctggcttctcttcttctctcgatact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ttacaacggtcttttccacaaattcgtgcttcttctggcttctcttcttctctcgatact 331
Query: 181 ggtgcgagcactgaattggatgctgtgtctagctttagtgaaatcgttcctgacaccgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ggtgcgagcactgaattggatgctgtgtctagctttagtgaaatcgttcctgacaccgtc 391
Query: 241 atattcgatgatttcgagaagtttcctccaactgctgctactgttagctcttcgcttctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 atattcgatgatttcgagaagtttcctccaactgctgctactgttagctcttcgcttctt 451
Query: 301 tt 302
||
Sbjct: 452 tt 453
Score = 97.6 bits (49), Expect = 8e-21
Identities = 56/57 (98%), Gaps = 1/57 (1%)
Strand = Plus / Plus
Query: 304 ggaatgcagtggatatggctttggccgattcaggttgtgctgctctgaaaaatcctg 360
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 486 ggaatgcagtggatatggctttggccgattca-gttgtgctgctctgaaaaatcctg 541
>gi|237680363|gb|GO246514.1|GO246514 JcrME_RL0058 Expressed sequence
tags from Jatropha curcas root cDNA library Jatropha
curcas cDNA, mRNA sequence
Length = 797
Score = 599 bits (302), Expect = e-172
Identities = 302/302 (100%)
Strand = Plus / Plus
Query: 1 atgtcactctccttgcaatctccgcccttttctgctctttactccaaatcatttcttcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 atgtcactctccttgcaatctccgcccttttctgctctttactccaaatcatttcttcag 213
Query: 61 aatggagggaacttgaggctgctaggtggatcgggagcttcaaatgcaatcttcttcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 aatggagggaacttgaggctgctaggtggatcgggagcttcaaatgcaatcttcttcaag 273
Query: 121 ttacaacggtcttttccacaaattcgtgcttcttctggcttctcttcttctctcgatact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ttacaacggtcttttccacaaattcgtgcttcttctggcttctcttcttctctcgatact 333
Query: 181 ggtgcgagcactgaattggatgctgtgtctagctttagtgaaatcgttcctgacaccgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ggtgcgagcactgaattggatgctgtgtctagctttagtgaaatcgttcctgacaccgtc 393
Query: 241 atattcgatgatttcgagaagtttcctccaactgctgctactgttagctcttcgcttctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 atattcgatgatttcgagaagtttcctccaactgctgctactgttagctcttcgcttctt 453
Query: 301 tt 302
||
Sbjct: 454 tt 455
Score = 113 bits (57), Expect = 1e-25
Identities = 57/57 (100%)
Strand = Plus / Plus
Query: 304 ggaatgcagtggatatggctttggccgattcaggttgtgctgctctgaaaaatcctg 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ggaatgcagtggatatggctttggccgattcaggttgtgctgctctgaaaaatcctg 544