Jatropha Genome Database

JcCB0365551.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0365551.10 - phase: 0 
         (486 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268518170|gb|FM888444.1|FM888444 FM888444 Jatropha curcas emb...   595   e-170

>gi|268518170|gb|FM888444.1|FM888444 FM888444 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001862,
           mRNA sequence
          Length = 356

 Score =  595 bits (300), Expect = e-170
 Identities = 304/306 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctacggcgtctttaggcgttcaaaagctactgcaagttgggacaaaaataatcgcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51  atggctacggcgtctttaggcgttcaaaagctactgcaagttgggacaaaaataatcgcc 110

                                                                       
Query: 61  gttggccgtaactacgccgctcatgccaaggaactcggcaacgccgttcctaaggagcca 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 111 gttggccgtaactacgccgctcatgccaaggaactcggcaacgccgttcctaaggagcna 170

                                                                       
Query: 121 gtgttgtttctcaaacccacatcgtcatacttggagaatggaggcacaatcgagattccc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 gtgttgtttctcaaacccacatcgtcatacttggagaatggaggcacaatcgagattccc 230

                                                                       
Query: 181 catccattggagtcgctggatcatgaagtggagctagctgttgtgatcggccagaaaggt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 catccattggagtcgctggatcatgaagtggagctagctgttgtgatcggccagaaaggt 290

                                                                       
Query: 241 cgcgatgtgccccagacaatcgctatggattatgttggaggctatgctcttggcttggat 300
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 cgcgatgtgcnccagacaatcgctatggattatgttggaggctatgctcttggcttggat 350

                 
Query: 301 atgact 306
           ||||||
Sbjct: 351 atgact 356