Jatropha Genome Database

JcCB0357801.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0357801.10 - phase: 0 
         (750 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268525821|gb|FM891076.1|FM891076 FM891076 Jatropha curcas emb...   987   0.0  

>gi|268525821|gb|FM891076.1|FM891076 FM891076 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_001069,
           mRNA sequence
          Length = 500

 Score =  987 bits (498), Expect = 0.0
 Identities = 498/498 (100%)
 Strand = Plus / Plus

                                                                       
Query: 239 ccattcttatagtctggttaatttaccgaccctacaaacctcagttcactgtagttggtg 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3   ccattcttatagtctggttaatttaccgaccctacaaacctcagttcactgtagttggtg 62

                                                                       
Query: 299 ctgccatttatgaccttaacacatcatctccacctttcatctccacttccatgcagttca 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63  ctgccatttatgaccttaacacatcatctccacctttcatctccacttccatgcagttca 122

                                                                       
Query: 359 ctcttgtgactagaaatcctaacaaaagagtctccataatctacgataaactctctgctt 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ctcttgtgactagaaatcctaacaaaagagtctccataatctacgataaactctctgctt 182

                                                                       
Query: 419 acgtttcttacagggaccaagcaataacgcctgcaatagcgttgcctccgctttatcatg 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 acgtttcttacagggaccaagcaataacgcctgcaatagcgttgcctccgctttatcatg 242

                                                                       
Query: 479 acacgaagagcactgtggcgctgtcgccagtgctgggtggctctaaagtgcctgtgtcgg 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 acacgaagagcactgtggcgctgtcgccagtgctgggtggctctaaagtgcctgtgtcgg 302

                                                                       
Query: 539 cggacgtggcgaatgggttggtgatggatgagagttatggggtggtggcattaagggttg 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 cggacgtggcgaatgggttggtgatggatgagagttatggggtggtggcattaagggttg 362

                                                                       
Query: 599 tgttgttggggagattgagatggaaagcaggggcaataaggacaggaagatatggggttt 658
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tgttgttggggagattgagatggaaagcaggggcaataaggacaggaagatatggggttt 422

                                                                       
Query: 659 atgtcaagtgtgatatttgggtgggtttgaagaagggtttgatagggcaagttcctttgc 718
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 atgtcaagtgtgatatttgggtgggtttgaagaagggtttgatagggcaagttcctttgc 482

                             
Query: 719 ttggatctccaaagtgca 736
           ||||||||||||||||||
Sbjct: 483 ttggatctccaaagtgca 500