Jatropha Genome Database

JcCB0353461.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0353461.10 - phase: 2 /partial
         (838 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268518395|gb|FM888669.1|FM888669 FM888669 Jatropha curcas emb...   846   0.0  

>gi|268518395|gb|FM888669.1|FM888669 FM888669 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002125,
           mRNA sequence
          Length = 551

 Score =  846 bits (427), Expect = 0.0
 Identities = 433/435 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgcaaggctgacgctgcagccctctgtgtcacgtgcgaccgtgacatccactccgcgaa 60
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 ttgcaacgctgacgctgcagccctctgtgtcacgtgcgaccgtgacatccactccgcgaa 176

                                                                       
Query: 61  tccactggctcgacgacacgaacgagttcctgtgacgcctttctacgactcggtcagctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 tccactggctcgacgacacgaacgagttcctgtgacgcctttctacgactcggtcagctc 236

                                                                       
Query: 121 ggcttccggcgttaagccaaacgcaataaacttcctcgatgaccgtcatttctccgacgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 ggcttccggcgttaagccaaacgcaataaacttcctcgatgaccgtcatttctccgacgt 296

                                                                       
Query: 181 ggatggggacgccgatgtcagcagagaggaagcagaagcagcctcttggcttcttccaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ggatggggacgccgatgtcagcagagaggaagcagaagcagcctcttggcttcttccaaa 356

                                                                       
Query: 241 ccctcccaaccctaaagttatggaaagtccggatctgaatacgggtcagtatgtgttctc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ccctcccaaccctaaagttatggaaagtccggatctgaatacgggtcagtatgtgttctc 416

                                                                       
Query: 301 agaaatggaaccgtatctggatctagattacgggcctgtggatccaaaacttgaatcaca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 agaaatggaaccgtatctggatctagattacgggcctgtggatccaaaacttgaatcaca 476

                                                                       
Query: 361 agagcagaatagctcaggcacagatggcgttgtacctgtacaaagcaagagcgttcaaac 420
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 477 agagcagaatagctcaggcacagatggcgttgtacctgtagaaagcaagagcgttcaaac 536

                          
Query: 421 tccattggtgaacga 435
           |||||||||||||||
Sbjct: 537 tccattggtgaacga 551