Jatropha Genome Database

JcCB0352111.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0352111.10 - phase: 0 /partial
         (186 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268518704|gb|FM888947.1|FM888947 FM888947 Jatropha curcas emb...   208   2e-54

>gi|268518704|gb|FM888947.1|FM888947 FM888947 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_002474,
           mRNA sequence
          Length = 284

 Score =  208 bits (105), Expect = 2e-54
 Identities = 111/113 (98%)
 Strand = Plus / Plus

                                                                       
Query: 74  tagagcttcagatacaacggcgtaaacaagctgttgaggatattaaggggaggagagaag 133
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tagagcttcagatacaacggcgtaaacaagctgttgaggatattaaggggaggagagaag 60

                                                                
Query: 134 aagcacagaaacttctcaaggaggctctcggaactttagatggccagagtgca 186
           |||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 61  aagcgcagaaacttctcaaggaggctctcggaactttacatggccagagtgca 113