Jatropha Genome Database
- JcCB0347171.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0347171.10 + phase: 0
(1398 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268522498|gb|FM894643.1|FM894643 FM894643 Jatropha curcas emb... 1029 0.0
gi|268522715|gb|FM896158.1|FM896158 FM896158 Jatropha curcas emb... 963 0.0
gi|268524060|gb|FM894739.1|FM894739 FM894739 Jatropha curcas emb... 940 0.0
gi|268526415|gb|FM895269.1|FM895269 FM895269 Jatropha curcas emb... 858 0.0
gi|268522307|gb|FM894452.1|FM894452 FM894452 Jatropha curcas emb... 767 0.0
gi|268524302|gb|FM894982.1|FM894982 FM894982 Jatropha curcas emb... 718 0.0
gi|268524061|gb|FM894740.1|FM894740 FM894740 Jatropha curcas emb... 174 2e-43
gi|268522595|gb|FM896636.1|FM896636 FM896636 Jatropha curcas emb... 76 1e-13
gi|218686978|gb|GH295946.1|GH295946 JCL395 Jatropha curcas total... 72 2e-12
gi|218687505|gb|GH295552.1|GH295552 JCL1 Jatropha curcas total l... 72 2e-12
>gi|268522498|gb|FM894643.1|FM894643 FM894643 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000453,
mRNA sequence
Length = 556
Score = 1029 bits (519), Expect = 0.0
Identities = 526/527 (99%), Gaps = 1/527 (0%)
Strand = Plus / Plus
Query: 1 atggaagcaagtgatttagttaagatactaggcgttcacc-gagtcacaccattagctag 59
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 30 atggaagcaagtgatttagttaagatactaggcgttcaccngagtcacaccattagctag 89
Query: 60 ctcacccaaatccactaccgagtcatctcttgctcttacacattttgatatgatttgcct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 ctcacccaaatccactaccgagtcatctcttgctcttacacattttgatatgatttgcct 149
Query: 120 caaattttatccagttgagcaaatctttttctatgagttcaacaatttaactttgtcatt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 caaattttatccagttgagcaaatctttttctatgagttcaacaatttaactttgtcatt 209
Query: 180 cttcaactcagtgatcatccctaaactcaaatcatcactctcacttgctctcctccattt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 cttcaactcagtgatcatccctaaactcaaatcatcactctcacttgctctcctccattt 269
Query: 240 ccttcctctagcaggaaacatcaaatggccttctaatgctaccaaaccatgcatcttata 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ccttcctctagcaggaaacatcaaatggccttctaatgctaccaaaccatgcatcttata 329
Query: 300 caccgtaaatgatggcattttggttaggattgcagaatcagctgcaaacttcacccatct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 caccgtaaatgatggcattttggttaggattgcagaatcagctgcaaacttcacccatct 389
Query: 360 ttcgagcaaccaaatgaaggaagcaattgagtcacgtctttatatacccgaattgaatat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ttcgagcaaccaaatgaaggaagcaattgagtcacgtctttatatacccgaattgaatat 449
Query: 420 atctgactcaacagctgccattatagctattcaaataactttatttccatatcaagggtt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 atctgactcaacagctgccattatagctattcaaataactttatttccatatcaagggtt 509
Query: 480 ttccattggagtcactgttcatcatgctgtttttgatggcaagagtt 526
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ttccattggagtcactgttcatcatgctgtttttgatggcaagagtt 556
>gi|268522715|gb|FM896158.1|FM896158 FM896158 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003323,
mRNA sequence
Length = 516
Score = 963 bits (486), Expect = 0.0
Identities = 493/494 (99%), Gaps = 1/494 (0%)
Strand = Plus / Plus
Query: 1 atggaagcaagtgatttagttaagatactaggcgttcaccgagtcacaccattagctagc 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 24 atggaagcaagtgatttagttaagatactaggcgt-caccgagtcacaccattagctagc 82
Query: 61 tcacccaaatccactaccgagtcatctcttgctcttacacattttgatatgatttgcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 tcacccaaatccactaccgagtcatctcttgctcttacacattttgatatgatttgcctc 142
Query: 121 aaattttatccagttgagcaaatctttttctatgagttcaacaatttaactttgtcattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 aaattttatccagttgagcaaatctttttctatgagttcaacaatttaactttgtcattc 202
Query: 181 ttcaactcagtgatcatccctaaactcaaatcatcactctcacttgctctcctccatttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ttcaactcagtgatcatccctaaactcaaatcatcactctcacttgctctcctccatttc 262
Query: 241 cttcctctagcaggaaacatcaaatggccttctaatgctaccaaaccatgcatcttatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cttcctctagcaggaaacatcaaatggccttctaatgctaccaaaccatgcatcttatac 322
Query: 301 accgtaaatgatggcattttggttaggattgcagaatcagctgcaaacttcacccatctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 accgtaaatgatggcattttggttaggattgcagaatcagctgcaaacttcacccatctt 382
Query: 361 tcgagcaaccaaatgaaggaagcaattgagtcacgtctttatatacccgaattgaatata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tcgagcaaccaaatgaaggaagcaattgagtcacgtctttatatacccgaattgaatata 442
Query: 421 tctgactcaacagctgccattatagctattcaaataactttatttccatatcaagggttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tctgactcaacagctgccattatagctattcaaataactttatttccatatcaagggttt 502
Query: 481 tccattggagtcac 494
||||||||||||||
Sbjct: 503 tccattggagtcac 516
>gi|268524060|gb|FM894739.1|FM894739 FM894739 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000592,
mRNA sequence
Length = 508
Score = 940 bits (474), Expect = 0.0
Identities = 483/485 (99%), Gaps = 1/485 (0%)
Strand = Plus / Plus
Query: 1 atggaagcaagtgatttagttaagatactaggcgttcaccgagtcacaccattagctagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24 atggaagcaagtgatttagttaagatactaggcgttcaccgagtcacaccattagctagc 83
Query: 61 tcacccaaatccactaccgagtcatctcttgctcttacacattttgatatgatttgcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 tcacccaaatccactaccgagtcatctcttgctcttacacattttgatatgatttgcctc 143
Query: 121 aaattttatccagttgagcaaatctttttctatgagttcaacaatttaactttgtcattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 aaattttatccagttgagcaaatctttttctatgagttcaacaatttaactttgtcattc 203
Query: 181 ttcaactcagtgatcatccctaaactcaaatcatcactctcacttgctctcctccatttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ttcaactcagtgatcatccctaaactcaaatcatcactctcacttgctctcctccatttc 263
Query: 241 cttcctctagcaggaaacatcaaatggccttctaatgctaccaaaccatgcatcttatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cttcctctagcaggaaacatcaaatggccttctaatgctaccaaaccatgcatcttatac 323
Query: 301 accgtaaatgatggcattttggttaggattgcagaatcagctgcaaacttcacccatctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 accgtaaatgatggcattttggttaggattgcagaatcagctgcaaacttcacccatctt 383
Query: 361 tcgagcaaccaaatgaaggaagcaattgagtcacgtctttatataccc-gaattgaatat 419
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 384 tcgagcaaccaaatgaaggaagcaattgagtcacgtcttnatatacccggaattgaatat 443
Query: 420 atctgactcaacagctgccattatagctattcaaataactttatttccatatcaagggtt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atctgactcaacagctgccattatagctattcaaataactttatttccatatcaagggtt 503
Query: 480 ttcca 484
|||||
Sbjct: 504 ttcca 508
>gi|268526415|gb|FM895269.1|FM895269 FM895269 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002067,
mRNA sequence
Length = 456
Score = 858 bits (433), Expect = 0.0
Identities = 433/433 (100%)
Strand = Plus / Plus
Query: 1 atggaagcaagtgatttagttaagatactaggcgttcaccgagtcacaccattagctagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24 atggaagcaagtgatttagttaagatactaggcgttcaccgagtcacaccattagctagc 83
Query: 61 tcacccaaatccactaccgagtcatctcttgctcttacacattttgatatgatttgcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 tcacccaaatccactaccgagtcatctcttgctcttacacattttgatatgatttgcctc 143
Query: 121 aaattttatccagttgagcaaatctttttctatgagttcaacaatttaactttgtcattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 aaattttatccagttgagcaaatctttttctatgagttcaacaatttaactttgtcattc 203
Query: 181 ttcaactcagtgatcatccctaaactcaaatcatcactctcacttgctctcctccatttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ttcaactcagtgatcatccctaaactcaaatcatcactctcacttgctctcctccatttc 263
Query: 241 cttcctctagcaggaaacatcaaatggccttctaatgctaccaaaccatgcatcttatac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cttcctctagcaggaaacatcaaatggccttctaatgctaccaaaccatgcatcttatac 323
Query: 301 accgtaaatgatggcattttggttaggattgcagaatcagctgcaaacttcacccatctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 accgtaaatgatggcattttggttaggattgcagaatcagctgcaaacttcacccatctt 383
Query: 361 tcgagcaaccaaatgaaggaagcaattgagtcacgtctttatatacccgaattgaatata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcgagcaaccaaatgaaggaagcaattgagtcacgtctttatatacccgaattgaatata 443
Query: 421 tctgactcaacag 433
|||||||||||||
Sbjct: 444 tctgactcaacag 456
>gi|268522307|gb|FM894452.1|FM894452 FM894452 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000120,
mRNA sequence
Length = 425
Score = 767 bits (387), Expect = 0.0
Identities = 401/403 (99%), Gaps = 2/403 (0%)
Strand = Plus / Plus
Query: 1 atggaagcaagtgattt-agttaagatactaggcgttcaccgagtcacaccattagctag 59
||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 24 atggaagcaagtgatttcagttaagatactaggcgt-caccgagtcacaccattagctag 82
Query: 60 ctcacccaaatccactaccgagtcatctcttgctcttacacattttgatatgatttgcct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 ctcacccaaatccactaccgagtcatctcttgctcttacacattttgatatgatttgcct 142
Query: 120 caaattttatccagttgagcaaatctttttctatgagttcaacaatttaactttgtcatt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 caaattttatccagttgagcaaatctttttctatgagttcaacaatttaactttgtcatt 202
Query: 180 cttcaactcagtgatcatccctaaactcaaatcatcactctcacttgctctcctccattt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cttcaactcagtgatcatccctaaactcaaatcatcactctcacttgctctcctccattt 262
Query: 240 ccttcctctagcaggaaacatcaaatggccttctaatgctaccaaaccatgcatcttata 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ccttcctctagcaggaaacatcaaatggccttctaatgctaccaaaccatgcatcttata 322
Query: 300 caccgtaaatgatggcattttggttaggattgcagaatcagctgcaaacttcacccatct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 caccgtaaatgatggcattttggttaggattgcagaatcagctgcaaacttcacccatct 382
Query: 360 ttcgagcaaccaaatgaaggaagcaattgagtcacgtctttat 402
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttcgagcaaccaaatgaaggaagcaattgagtcacgtctttat 425
>gi|268524302|gb|FM894982.1|FM894982 FM894982 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_001301,
mRNA sequence
Length = 615
Score = 718 bits (362), Expect = 0.0
Identities = 384/390 (98%), Gaps = 1/390 (0%)
Strand = Plus / Minus
Query: 1010 ttatcggaaatgttatacttatagaagcaggacctctttttgaagaga-atgggattaac 1068
||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||
Sbjct: 615 ttatcggaaatgttatactattagaagcaggacctcttttgatagagatatgggattaac 556
Query: 1069 tttattgttaagaagctcgacgataaaatacaagggttagagaaaggaactcttaaggga 1128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tttattgttaagaagctcgacgataaaatacaagggttagagaaaggaactcttaaggga 496
Query: 1129 gctaagcttgcaaactctttgaagcctatggagttgagtaaattagaagcgattggagtt 1188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gctaagcttgcaaactctttgaagcctatggagttgagtaaattagaagcgattggagtt 436
Query: 1189 gctggttcacctaagttcaagctttacgatatagattttggatgggggaggccaaaaaag 1248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 gctggttcacctaagttcaagctttacgatatagattttggatgggggaggccaaaaaag 376
Query: 1249 gtggagatagtatctatagatcgaagtggtgtaatttctatggtagagagcaaagatgaa 1308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gtggagatagtatctatagatcgaagtggtgtaatttctatggtagagagcaaagatgaa 316
Query: 1309 agtggtggtgttgagattggcttagttttgcagaagtatgaaatggagacgtttgattct 1368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 agtggtggtgttgagattggcttagttttgcagaagtatgaaatggagacgtttgattct 256
Query: 1369 ctatttgttaatggcattttagatctctaa 1398
||||||||||||||||||||||||||||||
Sbjct: 255 ctatttgttaatggcattttagatctctaa 226
>gi|268524061|gb|FM894740.1|FM894740 FM894740 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000594,
mRNA sequence
Length = 122
Score = 174 bits (88), Expect = 2e-43
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 3 ggaagcaagtgatttagttaagatactaggcgttcaccgagtcacaccattagctagctc 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 ggaagcaagtgatttagttaagatactaggcgttcaccgagtcacaccattagctagctc 94
Query: 63 acccaaatccactaccgagtcatctctt 90
||||||||||||||||||||||||||||
Sbjct: 95 acccaaatccactaccgagtcatctctt 122
>gi|268522595|gb|FM896636.1|FM896636 FM896636 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003906,
mRNA sequence
Length = 579
Score = 75.8 bits (38), Expect = 1e-13
Identities = 128/158 (81%)
Strand = Plus / Plus
Query: 113 tttgcctcaaattttatccagttgagcaaatctttttctatgagttcaacaatttaactt 172
|||| |||||||| || ||| |||| ||||||||| ||||||| || ||||| | |
Sbjct: 129 tttggctcaaattatacccaactgaggaaatcttttactatgagcaaaaagatttatcct 188
Query: 173 tgtcattcttcaactcagtgatcatccctaaactcaaatcatcactctcacttgctctcc 232
|||||||||| |||||||||| |||| || |||||||| || || || |||||||||
Sbjct: 189 tgtcattctttgactcagtgattgtccccaagctcaaatcctctctttcccttgctctct 248
Query: 233 tccatttccttcctctagcaggaaacatcaaatggcct 270
| || ||||||||| ||| ||||||||||| |||||||
Sbjct: 249 ttcacttccttcctttaggaggaaacatcatatggcct 286
Score = 63.9 bits (32), Expect = 5e-10
Identities = 107/132 (81%)
Strand = Plus / Plus
Query: 357 tctttcgagcaaccaaatgaaggaagcaattgagtcacgtctttatatacccgaattgaa 416
|||||||||||| || ||||| ||||| |||||||||||| | ||| | || || ||
Sbjct: 373 tctttcgagcaatcagatgaatgaagctattgagtcacgtatatatgttcctgagttagc 432
Query: 417 tatatctgactcaacagctgccattatagctattcaaataactttatttccatatcaagg 476
|||||||||||| | || || | ||| || ||||||||||| ||||||||| | |||||
Sbjct: 433 tatatctgactcgaaagtagcaactattgccattcaaataacattatttccaaaacaagg 492
Query: 477 gttttccattgg 488
|||||||||||
Sbjct: 493 cttttccattgg 504
>gi|218686978|gb|GH295946.1|GH295946 JCL395 Jatropha curcas total leaf
library Jatropha curcas cDNA, mRNA sequence
Length = 735
Score = 71.9 bits (36), Expect = 2e-12
Identities = 102/124 (82%)
Strand = Plus / Minus
Query: 1260 atctatagatcgaagtggtgtaatttctatggtagagagcaaagatgaaagtggtggtgt 1319
||||||||||| ||||| | ||||||||| ||||||||||||| |||||||| |
Sbjct: 523 atctatagatctgagtggaggcatttctatgtccgagagcaaagatgggagtggtggcat 464
Query: 1320 tgagattggcttagttttgcagaagtatgaaatggagacgtttgattctctatttgttaa 1379
|||| |||| ||||||||| || | ||||||||||| ||| ||||||||||||||||
Sbjct: 463 tgaggttggtttagttttgaagcaacatgaaatggagttgttcaattctctatttgttaa 404
Query: 1380 tggc 1383
||||
Sbjct: 403 tggc 400
>gi|218687505|gb|GH295552.1|GH295552 JCL1 Jatropha curcas total leaf
library Jatropha curcas cDNA, mRNA sequence
Length = 735
Score = 71.9 bits (36), Expect = 2e-12
Identities = 102/124 (82%)
Strand = Plus / Minus
Query: 1260 atctatagatcgaagtggtgtaatttctatggtagagagcaaagatgaaagtggtggtgt 1319
||||||||||| ||||| | ||||||||| ||||||||||||| |||||||| |
Sbjct: 523 atctatagatctgagtggaggcatttctatgtccgagagcaaagatgggagtggtggcat 464
Query: 1320 tgagattggcttagttttgcagaagtatgaaatggagacgtttgattctctatttgttaa 1379
|||| |||| ||||||||| || | ||||||||||| ||| ||||||||||||||||
Sbjct: 463 tgaggttggtttagttttgaagcaacatgaaatggagttgttcaattctctatttgttaa 404
Query: 1380 tggc 1383
||||
Sbjct: 403 tggc 400