Jatropha Genome Database

JcCB0335551.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0335551.10 - phase: 1 /partial
         (680 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268526342|gb|FM891598.1|FM891598 FM891598 Jatropha curcas emb...   993   0.0  

>gi|268526342|gb|FM891598.1|FM891598 FM891598 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_001919,
           mRNA sequence
          Length = 505

 Score =  993 bits (501), Expect = 0.0
 Identities = 501/501 (100%)
 Strand = Plus / Plus

                                                                       
Query: 160 ctcctacgcaagctctgaagcctggacagagaaactctcgatatgttgatgcagtgatga 219
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5   ctcctacgcaagctctgaagcctggacagagaaactctcgatatgttgatgcagtgatga 64

                                                                       
Query: 220 ctgttcctgctagggccatgatgcccattagtggaatcaacattgcttttgatcgcgagc 279
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65  ctgttcctgctagggccatgatgcccattagtggaatcaacattgcttttgatcgcgagc 124

                                                                       
Query: 280 tggtgggccctgctttgttgccagctttgaagttagctggggaaggaaagttgaggtggg 339
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 tggtgggccctgctttgttgccagctttgaagttagctggggaaggaaagttgaggtggg 184

                                                                       
Query: 340 aaacaatggaagatatctggagtggaatgtgtgttaaggttgtatgtgaccaccttgggc 399
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 aaacaatggaagatatctggagtggaatgtgtgttaaggttgtatgtgaccaccttgggc 244

                                                                       
Query: 400 ttggcgtgaaaagtgggctcccctatgtgtggagaaaggatcgaggtaatgcgattgaca 459
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ttggcgtgaaaagtgggctcccctatgtgtggagaaaggatcgaggtaatgcgattgaca 304

                                                                       
Query: 460 gcttgaaaaaagagtgggaaggcatgaagctcatggaggaagttgtccctttctttcagt 519
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gcttgaaaaaagagtgggaaggcatgaagctcatggaggaagttgtccctttctttcagt 364

                                                                       
Query: 520 cagtgaggttgccacggacagcagccacagcagaagattgtgtgattgagattgcaacag 579
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 cagtgaggttgccacggacagcagccacagcagaagattgtgtgattgagattgcaacag 424

                                                                       
Query: 580 cagtgaagcaacaattgggaccattagatcctgtttttactcgtgctggtgaagccatgt 639
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cagtgaagcaacaattgggaccattagatcctgtttttactcgtgctggtgaagccatgt 484

                                
Query: 640 tcgaatggatcaagatttgga 660
           |||||||||||||||||||||
Sbjct: 485 tcgaatggatcaagatttgga 505