Jatropha Genome Database

JcCB0331501.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0331501.10 + phase: 0 /partial
         (252 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|262091321|gb|GT228748.1|GT228748 JC313 Jatropha seeds from fr...   109   1e-24

>gi|262091321|gb|GT228748.1|GT228748 JC313 Jatropha seeds from
           fruits at three stages of maturation Jatropha curcas
           cDNA clone PL06SE.E07.scf 5', mRNA sequence
          Length = 603

 Score =  109 bits (55), Expect = 1e-24
 Identities = 69/71 (97%), Gaps = 2/71 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   acaaccaaaaccctcgagcggtatcaacgttgctgcttcactccccaagataacagcatt 60
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 529 acaaccaaaaccctcgagcggtatca-cgttgctgcttcactccccaagataacagc-tt 586

                      
Query: 61  gaacgtgagac 71
           |||||||||||
Sbjct: 587 gaacgtgagac 597