Jatropha Genome Database

JcCB0317451.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0317451.10 - phase: 0 /partial
         (835 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268525361|gb|FM896003.1|FM896003 FM896003 Jatropha curcas emb...   674   0.0  

>gi|268525361|gb|FM896003.1|FM896003 FM896003 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003130,
           mRNA sequence
          Length = 506

 Score =  674 bits (340), Expect = 0.0
 Identities = 340/340 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaggctgttgaaggtagctacttgtaacttgaaccagtgggctatggacttcgactgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 atgaggctgttgaaggtagctacttgtaacttgaaccagtgggctatggacttcgactgt 226

                                                                       
Query: 61  aacttgaagaacataaaggagtcaatatctaaggccaaacaagctggtgcggttattaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 aacttgaagaacataaaggagtcaatatctaaggccaaacaagctggtgcggttattaga 286

                                                                       
Query: 121 ctcggccctgaacttgaaatcactggctatggatgtgaagatcatttcttggagcttgac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ctcggccctgaacttgaaatcactggctatggatgtgaagatcatttcttggagcttgac 346

                                                                       
Query: 181 accgtcactcatgcatgggagtgtctgaaggaaattttgctcggcgattggactgatggg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 accgtcactcatgcatgggagtgtctgaaggaaattttgctcggcgattggactgatggg 406

                                                                       
Query: 241 ttattgtgcagttttgggatgccggttattaaaggatcagagcgttacaattgtcaagtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ttattgtgcagttttgggatgccggttattaaaggatcagagcgttacaattgtcaagtt 466

                                                   
Query: 301 ttgtgctttaacaggaaaattttaatgatacgtccaaaaa 340
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ttgtgctttaacaggaaaattttaatgatacgtccaaaaa 506