Jatropha Genome Database

JcCB0304051.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0304051.10 + phase: 0 
         (651 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268525098|gb|FM895740.1|FM895740 FM895740 Jatropha curcas emb...   291   5e-79

>gi|268525098|gb|FM895740.1|FM895740 FM895740 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002716,
           mRNA sequence
          Length = 170

 Score =  291 bits (147), Expect = 5e-79
 Identities = 166/170 (97%), Gaps = 3/170 (1%)
 Strand = Plus / Plus

                                                                       
Query: 274 ggagttattccatatgctgcaacaaattactttgcttatg--acacattacgg-aaagcc 330
           |||||||||||||||||||||||||||||||||||||||   ||||||||||| ||||||
Sbjct: 1   ggagttattccatatgctgcaacaaattactttgcttatagaacacattacgggaaagcc 60

                                                                       
Query: 331 tatcggaaagtttttaagcaagagaagattggcaacattgaaacccttctaattggatca 390
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tatcggaaagtttttaagcaagagaagattggcaacattgaaacccttctaattggatca 120

                                                             
Query: 391 gctgctggagctatttcaagtagtgcgaccttcccacttgaggttgctcg 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctgctggagctatttcaagtagtgcgaccttcccacttgaggttgctcg 170