Jatropha Genome Database

JcCB0298051.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0298051.10 + phase: 1 /partial
         (389 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268518112|gb|FM888386.1|FM888386 FM888386 Jatropha curcas emb...   396   e-111

>gi|268518112|gb|FM888386.1|FM888386 FM888386 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001791,
           mRNA sequence
          Length = 585

 Score =  396 bits (200), Expect = e-111
 Identities = 206/208 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   gaagcttagatcttgctgttgtgttgccactatacgtggctggagtcttttggacccttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gaagcttagatcttgctgttgtgttgccactatacgtggctggagtcttttggacccttg 437

                                                                       
Query: 61  tgtatgatacaatatatgcacatcaggataaggaggacgatttgaaagtaggtgttaaat 120
           |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 438 tgtatgatacgatatatgcacatcaggataaggaggacgatttgaaagtaagtgttaaat 497

                                                                       
Query: 121 caactgccttgagatttggggattcaacaaaggaatggatcactgggtttggaattgctt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 caactgccttgagatttggggattcaacaaaggaatggatcactgggtttggaattgctt 557

                                       
Query: 181 gcattagtagtcttgctcttagtggagt 208
           ||||||||||||||||||||||||||||
Sbjct: 558 gcattagtagtcttgctcttagtggagt 585