Jatropha Genome Database

JcCB0295761.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0295761.10 - phase: 2 /partial
         (517 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524469|gb|FM895149.1|FM895149 FM895149 Jatropha curcas emb...   323   1e-88

>gi|268524469|gb|FM895149.1|FM895149 FM895149 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_001928,
           mRNA sequence
          Length = 689

 Score =  323 bits (163), Expect = 1e-88
 Identities = 182/186 (97%), Gaps = 3/186 (1%)
 Strand = Plus / Plus

                                                                       
Query: 35  ggctctttttctcatggattcacttattctggccaccctgtatcatgtgcggttgccatt 94
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ggctctttttctcatggattcacttattctggccaccctgtatcatgtgcggttgccatt 566

                                                                       
Query: 95  gaagcactcaagatatacaagtatggagagaacattcctgagcaagtaagtaaaattgcc 154
           ||||||||||||||||||||| |  |||| ||||||||||||||||||||||||||||||
Sbjct: 567 gaagcactcaagatatacaagga--gaga-aacattcctgagcaagtaagtaaaattgcc 623

                                                                       
Query: 155 ccaaaattccaagatggtttaaaagcattctccgacagtcccatcataggagagattcgg 214
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ccaaaattccaagatggtttaaaagcattctccgacagtcccatcataggagagattcgg 683

                 
Query: 215 ggaact 220
           ||||||
Sbjct: 684 ggaact 689