Jatropha Genome Database

JcCB0293081.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0293081.10 + phase: 0 /partial/short
         (149 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|262091321|gb|GT228748.1|GT228748 JC313 Jatropha seeds from fr...    88   3e-18

>gi|262091321|gb|GT228748.1|GT228748 JC313 Jatropha seeds from
           fruits at three stages of maturation Jatropha curcas
           cDNA clone PL06SE.E07.scf 5', mRNA sequence
          Length = 603

 Score = 87.7 bits (44), Expect = 3e-18
 Identities = 122/148 (82%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggggagaggtagggttgagttgaagagaattgaaaacaagatcaacaggcaagttacc 60
           ||||| ||||| || |||||  ||||||| || || |||||||||||| ||||||| || 
Sbjct: 346 atgggaagaggaagagttgaactgaagaggatagagaacaagatcaaccggcaagtcact 405

                                                                       
Query: 61  tttgcaaagagaagaaatgggcttttgaagaaagcctatgagctttccgttctttgtgat 120
           ||  | || |||||||||||| | ||||||||||| || |||||||| ||||| || |||
Sbjct: 406 ttctcgaaaagaagaaatgggttgttgaagaaagcttacgagctttctgttctctgcgat 465

                                       
Query: 121 gctgaggttgctctcatcatcttctcta 148
           ||||| ||||| || || ||||||||||
Sbjct: 466 gctgaagttgcccttattatcttctcta 493