Jatropha Genome Database

JcCB0286581.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0286581.10 - phase: 0 
         (699 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268517833|gb|FM893208.1|FM893208 FM893208 Jatropha curcas emb...    70   4e-12

>gi|268517833|gb|FM893208.1|FM893208 FM893208 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb1_003974,
           mRNA sequence
          Length = 416

 Score = 69.9 bits (35), Expect = 4e-12
 Identities = 92/111 (82%)
 Strand = Plus / Plus

                                                                       
Query: 327 ttttatagctttaccaggtgggtatggaactctagaggagttattggaagtgatcacttg 386
           |||||| |||||||||||||| ||||| ||||| || |||||| | |||||||| || ||
Sbjct: 196 ttttattgctttaccaggtggttatgggactcttgaagagttacttgaagtgataacctg 255

                                                              
Query: 387 ggctcagcttggtatccatgacaagcctgtgggtttacttaatgttgatgg 437
            || || |||||||| |||||||| || ||||| ||  | |||||||||||
Sbjct: 256 cgcccaacttggtattcatgacaaaccggtgggattgttgaatgttgatgg 306