Jatropha Genome Database
- JcCB0284451.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0284451.30 - phase: 1 /partial
(341 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268524784|gb|FM895482.1|FM895482 FM895482 Jatropha curcas emb... 668 0.0
gi|268520175|gb|FM890023.1|FM890023 FM890023 Jatropha curcas emb... 210 7e-55
gi|268520453|gb|FM890301.1|FM890301 FM890301 Jatropha curcas emb... 127 9e-30
gi|268520733|gb|FM889491.1|FM889491 FM889491 Jatropha curcas emb... 54 1e-07
>gi|268524784|gb|FM895482.1|FM895482 FM895482 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002411,
mRNA sequence
Length = 498
Score = 668 bits (337), Expect = 0.0
Identities = 340/341 (99%)
Strand = Plus / Minus
Query: 1 acttcaatgacattattcactcaatcatcaatatggatgctgatgtgatcaccattgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 acttcaatgacattattcactcaatcatcaatatggatgctgatgtgatcaccattgaga 339
Query: 61 actctcgatccgatgaaaagcttctctccgtcttccgcgagggagtgaagtatggtgctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 actctcgatccgatgaaaagcttctctccgtcttccgcgagggagtgaagtatggtgctg 279
Query: 121 gaattggccctggtgtttatgatatccactctcctagaataccttcaactgaggagattg 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gaattggccttggtgtttatgatatccactctcctagaataccttcaactgaggagattg 219
Query: 181 ctgacagaattaacaagatgcttgcggttctcgagaagaacatcttgtgggttaaccctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 ctgacagaattaacaagatgcttgcggttctcgagaagaacatcttgtgggttaaccctg 159
Query: 241 actgtggtctcaaaactcgcaagtactctgaggtcaagcctgctctaaagaacatggttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 actgtggtctcaaaactcgcaagtactctgaggtcaagcctgctctaaagaacatggttg 99
Query: 301 ctgcagctaagctactccgcaccgagcttgccagtgccaag 341
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 ctgcagctaagctactccgcaccgagcttgccagtgccaag 58
>gi|268520175|gb|FM890023.1|FM890023 FM890023 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003807,
mRNA sequence
Length = 431
Score = 210 bits (106), Expect = 7e-55
Identities = 112/114 (98%)
Strand = Plus / Minus
Query: 228 tgggttaaccctgactgtggtctcaaaactcgcaagtactctgaggtcaagcctgctcta 287
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 431 tgggttaaccctgactgtggtctcaaaactcgcaagtactttgaggtcaagcctgctcta 372
Query: 288 aagaacatggttgctgcagctaagctactccgcaccgagcttgccagtgccaag 341
||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 371 aagaacatggttgctgcaggtaagctactccgcaccgagcttgccagtgccaag 318
>gi|268520453|gb|FM890301.1|FM890301 FM890301 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_004127,
mRNA sequence
Length = 371
Score = 127 bits (64), Expect = 9e-30
Identities = 64/64 (100%)
Strand = Plus / Minus
Query: 278 gcctgctctaaagaacatggttgctgcagctaagctactccgcaccgagcttgccagtgc 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gcctgctctaaagaacatggttgctgcagctaagctactccgcaccgagcttgccagtgc 300
Query: 338 caag 341
||||
Sbjct: 299 caag 296
>gi|268520733|gb|FM889491.1|FM889491 FM889491 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003165,
mRNA sequence
Length = 272
Score = 54.0 bits (27), Expect = 1e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 291 aacatggttgctgcagctaagctactccgcaccgagcttgccagtgccaag 341
|||||||||||||| || ||||| || ||||| |||||||| |||||||||
Sbjct: 176 aacatggttgctgctgccaagcttcttcgcactgagcttgcaagtgccaag 126