Jatropha Genome Database

JcCB0283991.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0283991.10 + phase: 0 /pseudo/partial
         (825 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524620|gb|FM895318.1|FM895318 FM895318 Jatropha curcas emb...   220   2e-57

>gi|268524620|gb|FM895318.1|FM895318 FM895318 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002126,
           mRNA sequence
          Length = 423

 Score =  220 bits (111), Expect = 2e-57
 Identities = 118/119 (99%), Gaps = 1/119 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgcatgagacctcacatgagccattaccagaggcgaaagatgatatgaactctgcttatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tgcatgagacctcacatgagccattaccagaggcgaaagatgatatgaactctgcttatt 365

                                                                      
Query: 61  cattgagtgttgaggcagcctatattaatctagaacttttcacagcaggttctaattag 119
           |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 366 cattgagtgttgaggcagcctatattaatc-agaacttttcacagcaggttctaattag 423