Jatropha Genome Database

JcCB0281811.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0281811.10 - phase: 0 /partial
         (862 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524620|gb|FM895318.1|FM895318 FM895318 Jatropha curcas emb...   511   e-145

>gi|268524620|gb|FM895318.1|FM895318 FM895318 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002126,
           mRNA sequence
          Length = 423

 Score =  511 bits (258), Expect = e-145
 Identities = 272/274 (99%), Gaps = 2/274 (0%)
 Strand = Plus / Plus

                                                                       
Query: 589 gaagatttacttctctgcggcgggcttgagttctacgacagatcatatgatagagtcacc 648
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1   gaagatttacttctctgcggcgggcttga-ttctacgacagatcatatgatagagtcacc 59

                                                                       
Query: 649 cctaaaaacgagcgtcgtttggagagattcaaaaaccgaaactttttcaaagtcaccacg 708
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 60  cctaaaaacgagcgtcgtttggagagattcaaaa-ccgaaactttttcaaagtcaccacg 118

                                                                       
Query: 709 actgatgatcctgtgattcggagacttgccaatgaagataaggctactgtgtttgctacg 768
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 actgatgatcctgtgattcggagacttgccaatgaagataaggctactgtgtttgctacg 178

                                                                       
Query: 769 gatactatcctggcaactttgatgtgtgcgcctaggtcggtatattcgtgggatattgtg 828
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 gatactatcctggcaactttgatgtgtgcgcctaggtcggtatattcgtgggatattgtg 238

                                             
Query: 829 attcagagagttggaaacaagctctttttcgata 862
           ||||||||||||||||||||||||||||||||||
Sbjct: 239 attcagagagttggaaacaagctctttttcgata 272