Jatropha Genome Database

JcCB0279151.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0279151.10 - phase: 0 
         (210 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268519636|gb|FM888103.1|FM888103 FM888103 Jatropha curcas emb...   410   e-115

>gi|268519636|gb|FM888103.1|FM888103 FM888103 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001437,
           mRNA sequence
          Length = 604

 Score =  410 bits (207), Expect = e-115
 Identities = 209/210 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggcggattgggcacctatattaataggattgttgctattcatacttctatctcctggg 60
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atggcggattgngcacctatattaataggattgttgctattcatacttctatctcctggg 446

                                                                       
Query: 61  ctcatattccagctaccaggaagcaccaggcatgtagaatttggcagcttcaagaccaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctcatattccagctaccaggaagcaccaggcatgtagaatttggcagcttcaagaccaat 386

                                                                       
Query: 121 ggcaaggctattgttgttcacactgtcatcttctttagtgtcttcaccattctcattctg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggcaaggctattgttgttcacactgtcatcttctttagtgtcttcaccattctcattctg 326

                                         
Query: 181 gcagttcgcgttcgcatttacactggctaa 210
           ||||||||||||||||||||||||||||||
Sbjct: 325 gcagttcgcgttcgcatttacactggctaa 296