Jatropha Genome Database
- JcCB0257561.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0257561.10 - phase: 0
(492 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|262091399|gb|GT228826.1|GT228826 JC391 Jatropha seeds from fr... 513 e-146
gi|268516675|gb|FM890382.1|FM890382 FM890382 Jatropha curcas emb... 327 7e-90
gi|268519687|gb|FM888154.1|FM888154 FM888154 Jatropha curcas emb... 327 7e-90
>gi|262091399|gb|GT228826.1|GT228826 JC391 Jatropha seeds from
fruits at three stages of maturation Jatropha curcas
cDNA clone PL08SE.A01.scf 5', mRNA sequence
Length = 261
Score = 513 bits (259), Expect = e-146
Identities = 259/259 (100%)
Strand = Plus / Plus
Query: 1 atggcaatatcgactctccagagactctcttctcaattccaccgcctcccatctttctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 atggcaatatcgactctccagagactctcttctcaattccaccgcctcccatctttctct 62
Query: 61 cctctcaccaaatccattctcgtccgcacctctgcctctgctgctaccacctcctcttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 cctctcaccaaatccattctcgtccgcacctctgcctctgctgctaccacctcctcttct 122
Query: 121 tcctccgccaaagtcgccgatagaatcgttaagcttttcgccgtcgatcttgacggtcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tcctccgccaaagtcgccgatagaatcgttaagcttttcgccgtcgatcttgacggtcag 182
Query: 181 aagcgggaagtcgttggcctctccggtcagacccttctcagggctttagctaactgtggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 aagcgggaagtcgttggcctctccggtcagacccttctcagggctttagctaactgtggc 242
Query: 241 ctcatcgatcctgcctccc 259
|||||||||||||||||||
Sbjct: 243 ctcatcgatcctgcctccc 261
>gi|268516675|gb|FM890382.1|FM890382 FM890382 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_004224,
mRNA sequence
Length = 276
Score = 327 bits (165), Expect = 7e-90
Identities = 165/165 (100%)
Strand = Plus / Minus
Query: 328 aagttgcctccgagatcttatgatgaggagtatgttttgaagagaaattctagagctagg 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aagttgcctccgagatcttatgatgaggagtatgttttgaagagaaattctagagctagg 217
Query: 388 gttttgaacaagcatgctagattgggatgccaggtcgtccttacaccagacctgaaaggt 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 gttttgaacaagcatgctagattgggatgccaggtcgtccttacaccagacctgaaaggt 157
Query: 448 atggttgttgctatccctgagccaaaaccatgggatatcccctaa 492
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 atggttgttgctatccctgagccaaaaccatgggatatcccctaa 112
>gi|268519687|gb|FM888154.1|FM888154 FM888154 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001495,
mRNA sequence
Length = 370
Score = 327 bits (165), Expect = 7e-90
Identities = 165/165 (100%)
Strand = Plus / Minus
Query: 328 aagttgcctccgagatcttatgatgaggagtatgttttgaagagaaattctagagctagg 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aagttgcctccgagatcttatgatgaggagtatgttttgaagagaaattctagagctagg 311
Query: 388 gttttgaacaagcatgctagattgggatgccaggtcgtccttacaccagacctgaaaggt 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gttttgaacaagcatgctagattgggatgccaggtcgtccttacaccagacctgaaaggt 251
Query: 448 atggttgttgctatccctgagccaaaaccatgggatatcccctaa 492
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 atggttgttgctatccctgagccaaaaccatgggatatcccctaa 206