Jatropha Genome Database

JcCB0254931.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0254931.10 - phase: 0 
         (234 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524358|gb|FM895038.1|FM895038 FM895038 Jatropha curcas emb...   446   e-126

>gi|268524358|gb|FM895038.1|FM895038 FM895038 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_001380,
           mRNA sequence
          Length = 547

 Score =  446 bits (225), Expect = e-126
 Identities = 225/225 (100%)
 Strand = Plus / Minus

                                                                       
Query: 10  gctatagccactgttgtcactgttgcagaaatcctgaaaaacaatggattggctattgaa 69
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gctatagccactgttgtcactgttgcagaaatcctgaaaaacaatggattggctattgaa 447

                                                                       
Query: 70  aagaagatcatgacttcaacagttgatatgagagatgaagcaagagggcggcctgtacag 129
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 aagaagatcatgacttcaacagttgatatgagagatgaagcaagagggcggcctgtacag 387

                                                                       
Query: 130 aaagctaagattgagatattgctcgggaaaactgaaaatttcgatgaattgatggctgct 189
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aaagctaagattgagatattgctcgggaaaactgaaaatttcgatgaattgatggctgct 327

                                                        
Query: 190 gctgctgaagagagggaaatggcagatgctgaagagcagagttga 234
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gctgctgaagagagggaaatggcagatgctgaagagcagagttga 282