Jatropha Genome Database

JcCB0242111.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0242111.10 - phase: 2 /partial
         (685 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268522860|gb|FM896303.1|FM896303 FM896303 Jatropha curcas emb...   117   2e-26

>gi|268522860|gb|FM896303.1|FM896303 FM896303 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003495,
           mRNA sequence
          Length = 511

 Score =  117 bits (59), Expect = 2e-26
 Identities = 143/171 (83%)
 Strand = Plus / Minus

                                                                       
Query: 509 tccactatgagggctttggataaccttggcctagacatccagcaagctgtcatcagttgt 568
           ||||| ||||||||| |||| ||||||||| | || || ||||||||||||||||| |||
Sbjct: 471 tccacaatgagggctctggacaaccttggcttggatattcagcaagctgtcatcagctgt 412

                                                                       
Query: 569 ttcaatggttttgccatggatatctttcgagctgagcaatgtaaagaagggcaagatgtt 628
           |||||||| |||||  | ||| | ||||||||||||||||| |  ||||| || ||||||
Sbjct: 411 ttcaatgggtttgcactagatgtgtttcgagctgagcaatgcagggaaggtcaggatgtt 352

                                                              
Query: 629 catcctgagcaaataaaagcagtgcttctggattcagctggcttccatgga 679
              || |||||||| || ||||| ||||||||||||||||| || ||||||
Sbjct: 351 ttaccagagcaaatcaaggcagtacttctggattcagctggttttcatgga 301