Jatropha Genome Database

JcCB0238621.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0238621.10 - phase: 0 /pseudo/partial
         (435 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268519628|gb|FM888095.1|FM888095 FM888095 Jatropha curcas emb...   496   e-140

>gi|268519628|gb|FM888095.1|FM888095 FM888095 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_001428,
           mRNA sequence
          Length = 663

 Score =  496 bits (250), Expect = e-140
 Identities = 257/258 (99%), Gaps = 1/258 (0%)
 Strand = Plus / Plus

                                                                       
Query: 127 gcaaatcgctttaggaacactaagtctccaggaaggatatctatggctattgcagtcaat 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gcaaatcgctttaggaacactaagtctccaggaaggatatctatggctattgcagtcaat 60

                                                                       
Query: 187 gtatctcgtttcgaaggtataacaatggctcccc-tgatccaattcttggtgtatcagaa 245
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 61  gtatctcgtttcgaaggtataacaatggctccccctgatccaattcttggtgtatcagaa 120

                                                                       
Query: 246 gcttttcgagcagacacaaatgatttgaaactcaaccttggagttggggcctaccgaact 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcttttcgagcagacacaaatgatttgaaactcaaccttggagttggggcctaccgaact 180

                                                                       
Query: 306 gaagagctacatccttatgttctcaatgttgttaagaaggcagagaatcttatgctggag 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaagagctacatccttatgttctcaatgttgttaagaaggcagagaatcttatgctggag 240

                             
Query: 366 aggggtgaatataaagag 383
           ||||||||||||||||||
Sbjct: 241 aggggtgaatataaagag 258