Jatropha Genome Database

JcCB0236701.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0236701.10 - phase: 2 /partial
         (349 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|262091321|gb|GT228748.1|GT228748 JC313 Jatropha seeds from fr...    88   8e-18

>gi|262091321|gb|GT228748.1|GT228748 JC313 Jatropha seeds from
           fruits at three stages of maturation Jatropha curcas
           cDNA clone PL06SE.E07.scf 5', mRNA sequence
          Length = 603

 Score = 87.7 bits (44), Expect = 8e-18
 Identities = 113/136 (83%)
 Strand = Plus / Plus

                                                                       
Query: 6   caaaaatggggagaggtaggattcaactgaagcggatcgagaataagattagcagacaag 65
           |||||||||| ||||| ||  || |||||||| |||| ||||| ||||| | | | ||||
Sbjct: 341 caaaaatgggaagaggaagagttgaactgaagaggatagagaacaagatcaaccggcaag 400

                                                                       
Query: 66  tcactttctctaaaagaagaactggtctgctgaagaaagctcatgagatctcagttcttt 125
           |||||||||| |||||||||| |||  || ||||||||||| | ||| | || ||||| |
Sbjct: 401 tcactttctcgaaaagaagaaatgggttgttgaagaaagcttacgagctttctgttctct 460

                           
Query: 126 gcgatgctgaagttgc 141
           ||||||||||||||||
Sbjct: 461 gcgatgctgaagttgc 476