Jatropha Genome Database

JcCB0234291.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0234291.10 - phase: 1 /partial
         (1310 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268525475|gb|FM896117.1|FM896117 FM896117 Jatropha curcas emb...   805   0.0  

>gi|268525475|gb|FM896117.1|FM896117 FM896117 Jatropha curcas embryo
            71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_003269,
            mRNA sequence
          Length = 562

 Score =  805 bits (406), Expect = 0.0
 Identities = 406/406 (100%)
 Strand = Plus / Plus

                                                                        
Query: 830  aggtattgggtatttacatgggaatagaggaaataaacctgctctttttcaccagaatat 889
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157  aggtattgggtatttacatgggaatagaggaaataaacctgctctttttcaccagaatat 216

                                                                        
Query: 890  atcagctgagaaagtgttcattgatagacgatataatccattactctcatattcaggcct 949
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217  atcagctgagaaagtgttcattgatagacgatataatccattactctcatattcaggcct 276

                                                                        
Query: 950  gcacaaaattcttgcagatgacattatcttctctatgctaaaagctagtgctgccatggg 1009
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277  gcacaaaattcttgcagatgacattatcttctctatgctaaaagctagtgctgccatggg 336

                                                                        
Query: 1010 atacctggctcctgagtacacaactactggccgtttcactgaaaagagtgatgtttatgc 1069
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337  atacctggctcctgagtacacaactactggccgtttcactgaaaagagtgatgtttatgc 396

                                                                        
Query: 1070 atttggtgtgattatactacaactcctcagtggaaaacataacgttacaccattgacttg 1129
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397  atttggtgtgattatactacaactcctcagtggaaaacataacgttacaccattgacttg 456

                                                                        
Query: 1130 ccacgcaggggaatcatgcaatgtagaagactttattgatgcaaatcttgaaggaaagta 1189
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457  ccacgcaggggaatcatgcaatgtagaagactttattgatgcaaatcttgaaggaaagta 516

                                                          
Query: 1190 ctcagaattagatgcagccacacttgggagattagctcttctttgc 1235
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517  ctcagaattagatgcagccacacttgggagattagctcttctttgc 562