Jatropha Genome Database

JcCB0231591.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0231591.10 + phase: 1 /pseudo/partial
         (476 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|262090775|gb|GT229133.1|GT229133 JC698 Jatropha seeds from fr...   178   4e-45
gi|262090580|gb|GT228938.1|GT228938 JC503 Jatropha seeds from fr...   176   1e-44

>gi|262090775|gb|GT229133.1|GT229133 JC698 Jatropha seeds from
           fruits at three stages of maturation Jatropha curcas
           cDNA clone PL16SE.E09.scf 5', mRNA sequence
          Length = 300

 Score =  178 bits (90), Expect = 4e-45
 Identities = 108/114 (94%)
 Strand = Plus / Minus

                                                                       
Query: 363 atttgtgaatctgctgatgatactgtgaaggttaatttaccttatggggccaaggtatta 422
           |||||||||||||||||||||| ||||||||||||| |||||||||| |||||  | |||
Sbjct: 261 atttgtgaatctgctgatgatattgtgaaggttaatgtaccttatggcgccaaattgtta 202

                                                                 
Query: 423 tgccaggagcttttcagcatgggtataagtctgaagtttgaaactcagctttgc 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgccaggagcttttcagcatgggtataagtctgaagtttgaaactcagctttgc 148


>gi|262090580|gb|GT228938.1|GT228938 JC503 Jatropha seeds from
           fruits at three stages of maturation Jatropha curcas
           cDNA clone PL11SE.E01.scf 5', mRNA sequence
          Length = 511

 Score =  176 bits (89), Expect = 1e-44
 Identities = 107/113 (94%)
 Strand = Plus / Minus

                                                                       
Query: 364 tttgtgaatctgctgatgatactgtgaaggttaatttaccttatggggccaaggtattat 423
           ||||||||||||||||||||| ||||||||||||| |||||||||| |||||  | ||||
Sbjct: 441 tttgtgaatctgctgatgatattgtgaaggttaatgtaccttatggcgccaaattgttat 382

                                                                
Query: 424 gccaggagcttttcagcatgggtataagtctgaagtttgaaactcagctttgc 476
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gccaggagcttttcagcatgggtataagtctgaagtttgaaactcagctttgc 329