Jatropha Genome Database
- JcCB0229681.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0229681.20 - phase: 2 /partial
(550 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268521314|gb|FM892033.1|FM892033 FM892033 Jatropha curcas emb... 335 3e-92
gi|268517746|gb|FM893121.1|FM893121 FM893121 Jatropha curcas emb... 262 4e-70
gi|268516956|gb|FM892508.1|FM892508 FM892508 Jatropha curcas emb... 248 6e-66
>gi|268521314|gb|FM892033.1|FM892033 FM892033 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_002490,
mRNA sequence
Length = 506
Score = 335 bits (169), Expect = 3e-92
Identities = 185/189 (97%), Gaps = 1/189 (0%)
Strand = Plus / Plus
Query: 1 gaaccctgagcgtgcaatcaggaaagcatacaaggctaccgataatgagattttggatgg 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 319 gaaccctgagcgtgcaatcaggaaagcataccaggctaccgataatgagattttggatgg 378
Query: 61 aatagttggttcaagaggaggttcaacagcagttactgcaattctaatagatgaggaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aatagttggttcaagaggaggttcaacagcagttactgcaattctaatagatgaggaaaa 438
Query: 121 tctaattgtggcaaatgttggcgactccagagcagtcttgtgtagaaacggtgttgcaaa 180
|||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||
Sbjct: 439 tctaattgtggcaaatgttggcgactccagagcagt-ttgtgttgaaacggtgtagcaaa 497
Query: 181 gcagttatc 189
|||||||||
Sbjct: 498 gcagttatc 506
>gi|268517746|gb|FM893121.1|FM893121 FM893121 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb1_003861,
mRNA sequence
Length = 309
Score = 262 bits (132), Expect = 4e-70
Identities = 132/132 (100%)
Strand = Plus / Minus
Query: 419 atgtcaaaccaggaggcttgtgagtgcattgcaggcttggaagatgcgcaagaagcatca 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 atgtcaaaccaggaggcttgtgagtgcattgcaggcttggaagatgcgcaagaagcatca 250
Query: 479 gagaagttgatagatgaagcattagtcaggggaagcatggatgatatctcctgcatagct 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gagaagttgatagatgaagcattagtcaggggaagcatggatgatatctcctgcatagct 190
Query: 539 gtggtttttcac 550
||||||||||||
Sbjct: 189 gtggtttttcac 178
>gi|268516956|gb|FM892508.1|FM892508 FM892508 Jatropha curcas embryo
56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_003074,
mRNA sequence
Length = 514
Score = 248 bits (125), Expect = 6e-66
Identities = 131/133 (98%)
Strand = Plus / Plus
Query: 1 gaaccctgagcgtgcaatcaggaaagcatacaaggctaccgataatgagattttggatgg 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 382 gaaccctgagcgtgcaatcaggaaagcatacaaggctagcgataatgagattttggatgg 441
Query: 61 aatagttggttcaagaggaggttcaacagcagttactgcaattctaatagatgaggaaaa 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 442 aatagttggttcaagaggaggttcaacagcagttactgcaatactaatagatgaggaaaa 501
Query: 121 tctaattgtggca 133
|||||||||||||
Sbjct: 502 tctaattgtggca 514