Jatropha Genome Database
- JcCB0227741.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0227741.10 - phase: 2 /partial
(175 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|262090956|gb|GT229314.1|GT229314 JC879 Jatropha seeds from fr... 339 6e-94
gi|268520410|gb|FM890258.1|FM890258 FM890258 Jatropha curcas emb... 305 8e-84
gi|268525209|gb|FM895851.1|FM895851 FM895851 Jatropha curcas emb... 297 2e-81
>gi|262090956|gb|GT229314.1|GT229314 JC879 Jatropha seeds from
fruits at three stages of maturation Jatropha curcas
cDNA clone PL21SE.H04.scf 5', mRNA sequence
Length = 423
Score = 339 bits (171), Expect = 6e-94
Identities = 174/175 (99%)
Strand = Plus / Minus
Query: 1 gtggattagtgatagccgtgatgaatataccaatgagcgactagaggcaataaatgatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gtggattagtgatagccgtgatgaatataccaatgagcgactagaggcaataaatgatga 230
Query: 61 gttcaagctctaccgctgccataccatattgaattgcgcacgtgcctgccctaaaggctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gttcaagctctaccgctgccataccatattgaattgcgcacgtgcctgccctaaaggctt 170
Query: 121 gaaccctggaaagcagatcatgaatatcaaacggctcgagctagttggtggtgtt 175
||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 gaaacctggaaagcagatcatgaatatcaaacggctcgagctagttggtggtgtt 115
>gi|268520410|gb|FM890258.1|FM890258 FM890258 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_004075,
mRNA sequence
Length = 221
Score = 305 bits (154), Expect = 8e-84
Identities = 154/154 (100%)
Strand = Plus / Plus
Query: 1 gtggattagtgatagccgtgatgaatataccaatgagcgactagaggcaataaatgatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 gtggattagtgatagccgtgatgaatataccaatgagcgactagaggcaataaatgatga 127
Query: 61 gttcaagctctaccgctgccataccatattgaattgcgcacgtgcctgccctaaaggctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 gttcaagctctaccgctgccataccatattgaattgcgcacgtgcctgccctaaaggctt 187
Query: 121 gaaccctggaaagcagatcatgaatatcaaacgg 154
||||||||||||||||||||||||||||||||||
Sbjct: 188 gaaccctggaaagcagatcatgaatatcaaacgg 221
>gi|268525209|gb|FM895851.1|FM895851 FM895851 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002847,
mRNA sequence
Length = 417
Score = 297 bits (150), Expect = 2e-81
Identities = 153/154 (99%)
Strand = Plus / Plus
Query: 1 gtggattagtgatagccgtgatgaatataccaatgagcgactagaggcaataaatgatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtggattagtgatagccgtgatgaatataccaatgagcgactagaggcaataaatgatga 323
Query: 61 gttcaagctctaccgctgccataccatattgaattgcgcacgtgcctgccctaaaggctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 324 gttcaagctctaccgctgccataccatattgaattgcgcacgtgcctgccctaaatgctt 383
Query: 121 gaaccctggaaagcagatcatgaatatcaaacgg 154
||||||||||||||||||||||||||||||||||
Sbjct: 384 gaaccctggaaagcagatcatgaatatcaaacgg 417