Jatropha Genome Database

JcCB0227251.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0227251.10 + phase: 1 /partial
         (827 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268521510|gb|FM894262.1|FM894262 FM894262 Jatropha curcas emb...   531   e-151

>gi|268521510|gb|FM894262.1|FM894262 FM894262 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_004570,
           mRNA sequence
          Length = 627

 Score =  531 bits (268), Expect = e-151
 Identities = 268/268 (100%)
 Strand = Plus / Plus

                                                                       
Query: 560 gaaaagacttcgccatccaaatgtattgcttttcatgggtgctgttacttcagctcagcg 619
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gaaaagacttcgccatccaaatgtattgcttttcatgggtgctgttacttcagctcagcg 60

                                                                       
Query: 620 tctctgcattgtcacggagttccttccacgtggaagtttgtttcggttactccagaggaa 679
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tctctgcattgtcacggagttccttccacgtggaagtttgtttcggttactccagaggaa 120

                                                                       
Query: 680 cacaactaaactggattggaggcggcgcatccatatggcattggatatagcgcgtggtat 739
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cacaactaaactggattggaggcggcgcatccatatggcattggatatagcgcgtggtat 180

                                                                       
Query: 740 gaattatcttcatcatttcaatccacctatcattcatcgtgatttgaagtcttcaaatct 799
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaattatcttcatcatttcaatccacctatcattcatcgtgatttgaagtcttcaaatct 240

                                       
Query: 800 tctggttgataggaactggaccgtaaag 827
           ||||||||||||||||||||||||||||
Sbjct: 241 tctggttgataggaactggaccgtaaag 268