Jatropha Genome Database

JcCB0219281.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0219281.10 + phase: 0 /partial
         (441 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268520249|gb|FM890097.1|FM890097 FM890097 Jatropha curcas emb...   628   e-180

>gi|268520249|gb|FM890097.1|FM890097 FM890097 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003892,
           mRNA sequence
          Length = 520

 Score =  628 bits (317), Expect = e-180
 Identities = 317/317 (100%)
 Strand = Plus / Plus

                                                                       
Query: 125 gtcatgggcatcaggttattccatggggtgatctagactcgctagccatgctccagagac 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gtcatgggcatcaggttattccatggggtgatctagactcgctagccatgctccagagac 60

                                                                       
Query: 185 agttggatgtagacatacttgtgacaggtcatacccatcaattcacagcttacaagcatg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  agttggatgtagacatacttgtgacaggtcatacccatcaattcacagcttacaagcatg 120

                                                                       
Query: 245 aaggaggagttgttataaacccaggatctgccacgggtgcttacagcagcattacctatg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaggaggagttgttataaacccaggatctgccacgggtgcttacagcagcattacctatg 180

                                                                       
Query: 305 atgttaatcctagctttgttcttatggacatcgatggcctccgcgttgtggtgtacgtat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgttaatcctagctttgttcttatggacatcgatggcctccgcgttgtggtgtacgtat 240

                                                                       
Query: 365 atgagctcattgacggagaggttaaagttgacaagattgattttaagaagacaagtacca 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgagctcattgacggagaggttaaagttgacaagattgattttaagaagacaagtacca 300

                            
Query: 425 cgcctcatgccgctcat 441
           |||||||||||||||||
Sbjct: 301 cgcctcatgccgctcat 317