Jatropha Genome Database

JcCB0212401.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0212401.10 - phase: 0 
         (468 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268516568|gb|FM887047.1|FM887047 FM887047 Jatropha curcas emb...   706   0.0  

>gi|268516568|gb|FM887047.1|FM887047 FM887047 Jatropha curcas embryo
           35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_000116,
           mRNA sequence
          Length = 560

 Score =  706 bits (356), Expect = 0.0
 Identities = 358/359 (99%)
 Strand = Plus / Plus

                                                                       
Query: 36  actggctcttgtcagtggattgaagtgggtggatgaagtcatagccaattctccttatgc 95
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 actggctcttgtcagtggattgaagtgggtggatgaagtcatagccaattctccttatgc 261

                                                                       
Query: 96  cattacagagcaattcatgaacactctcttcaatgagcataaaattgactatatcataca 155
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 cattacagagcaattcatgaacactctcttcaatgagcataaaattgactatatcataca 321

                                                                       
Query: 156 tggcgatgatccttgcctgcttcctgatggaactgacgcttatgcattggccaagagggc 215
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tggcgatgatccttgcctgcttcctgatggaactgacgcttatgcattggccaagagggc 381

                                                                       
Query: 216 tggacgctataagcagattaaacgcactgaaggggtctccagcactgatattgtaggaag 275
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tggacgctataagcagattaaacgcactgaaggggtctccagcactgatattgtaggaag 441

                                                                       
Query: 276 gatactttctgtggatgatccaaaagtttgtgaagctcatgatgataagttgcctttacc 335
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 442 gatactttctgtggatgatccanaagtttgtgaagctcatgatgataagttgcctttacc 501

                                                                      
Query: 336 tagagatgcctgtaaagcaaatcaatccagtggtgcctatatatctcaatttctaccaa 394
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tagagatgcctgtaaagcaaatcaatccagtggtgcctatatatctcaatttctaccaa 560