Jatropha Genome Database

JcCB0209291.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0209291.10 + phase: 0 /partial
         (499 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268524169|gb|FM894848.1|FM894848 FM894848 Jatropha curcas emb...   281   4e-76

>gi|268524169|gb|FM894848.1|FM894848 FM894848 Jatropha curcas embryo
           71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_000735,
           mRNA sequence
          Length = 533

 Score =  281 bits (142), Expect = 4e-76
 Identities = 142/142 (100%)
 Strand = Plus / Minus

                                                                       
Query: 212 cagatgcttctttttctgaatctctatatggattgcgaagaagagcagtgaagataaaag 271
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 cagatgcttctttttctgaatctctatatggattgcgaagaagagcagtgaagataaaag 284

                                                                       
Query: 272 caaagaatttgagctcaggggaagcaattgaactctctggattacagaagcaccaaagag 331
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 caaagaatttgagctcaggggaagcaattgaactctctggattacagaagcaccaaagag 224

                                 
Query: 332 ttctctcagttgcatttctggt 353
           ||||||||||||||||||||||
Sbjct: 223 ttctctcagttgcatttctggt 202