Jatropha Genome Database

JcCB0200941.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0200941.10 + phase: 0 
         (2220 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268520867|gb|FM889625.1|FM889625 FM889625 Jatropha curcas emb...   200   5e-51

>gi|268520867|gb|FM889625.1|FM889625 FM889625 Jatropha curcas embryo
            35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_003328,
            mRNA sequence
          Length = 453

 Score =  200 bits (101), Expect = 5e-51
 Identities = 104/105 (99%)
 Strand = Plus / Minus

                                                                        
Query: 2112 acttcctattgatagagacagatcttacatcgttgagatatctggaagagtcttggatga 2171
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441  acttcctattgatggagacagatcttacatcgttgagatatctggaagagtcttggatga 382

                                                         
Query: 2172 agaaactggcgaggaacttgatagtctaggcaaacttgctccaac 2216
            |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381  agaaactggcgaggaacttgatagtctaggcaaacttgctccaac 337