Jatropha Genome Database
- JcCB0198891.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCB0198891.10 + phase: 0
(699 letters)
Database: JAT_13201ests
13,201 sequences; 6,040,684 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|268525209|gb|FM895851.1|FM895851 FM895851 Jatropha curcas emb... 519 e-147
gi|262090956|gb|GT229314.1|GT229314 JC879 Jatropha seeds from fr... 270 2e-72
gi|268520410|gb|FM890258.1|FM890258 FM890258 Jatropha curcas emb... 123 3e-28
>gi|268525209|gb|FM895851.1|FM895851 FM895851 Jatropha curcas embryo
71-95 (DAF) Jatropha curcas cDNA clone rjcpga0_002847,
mRNA sequence
Length = 417
Score = 519 bits (262), Expect = e-147
Identities = 262/262 (100%)
Strand = Plus / Plus
Query: 415 ccccacatgtatgttattaaggatttggtcgtggatatgactaatttctataatcaatat 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ccccacatgtatgttattaaggatttggtcgtggatatgactaatttctataatcaatat 63
Query: 475 aagagtattgagccttggcttaagagaaagaacccgcctcaggttcctggcaaagagata 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 aagagtattgagccttggcttaagagaaagaacccgcctcaggttcctggcaaagagata 123
Query: 535 ttgcagagtaagaaagatagggctaagcttgatgggatgtatgagtgtatattgtgtgct 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 ttgcagagtaagaaagatagggctaagcttgatgggatgtatgagtgtatattgtgtgct 183
Query: 595 tgctgcagcacatcctgccctagctattggtggaatcctgagtcttacttgggtccagct 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tgctgcagcacatcctgccctagctattggtggaatcctgagtcttacttgggtccagct 243
Query: 655 gctttgctccatgctaatcggt 676
||||||||||||||||||||||
Sbjct: 244 gctttgctccatgctaatcggt 265
>gi|262090956|gb|GT229314.1|GT229314 JC879 Jatropha seeds from
fruits at three stages of maturation Jatropha curcas
cDNA clone PL21SE.H04.scf 5', mRNA sequence
Length = 423
Score = 270 bits (136), Expect = 2e-72
Identities = 136/136 (100%)
Strand = Plus / Minus
Query: 541 agtaagaaagatagggctaagcttgatgggatgtatgagtgtatattgtgtgcttgctgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 agtaagaaagatagggctaagcttgatgggatgtatgagtgtatattgtgtgcttgctgc 364
Query: 601 agcacatcctgccctagctattggtggaatcctgagtcttacttgggtccagctgctttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 agcacatcctgccctagctattggtggaatcctgagtcttacttgggtccagctgctttg 304
Query: 661 ctccatgctaatcggt 676
||||||||||||||||
Sbjct: 303 ctccatgctaatcggt 288
>gi|268520410|gb|FM890258.1|FM890258 FM890258 Jatropha curcas embryo
35-55 (DAF) Jatropha curcas cDNA clone rjcfea0_004075,
mRNA sequence
Length = 221
Score = 123 bits (62), Expect = 3e-28
Identities = 69/70 (98%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 607 tcctgccctagctattggtggaatcctgagtcttacttgggtccagctgctttgctccat 666
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcctgccctagctattggtgga-tcctgagtcttacttgggtccagctgctttgctccat 59
Query: 667 gctaatcggt 676
||||||||||
Sbjct: 60 gctaatcggt 69