Jatropha Genome Database

JcCB0190821.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCB0190821.10 - phase: 0 /pseudo
         (708 letters)

Database: JAT_13201ests 
           13,201 sequences; 6,040,684 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|268526378|gb|FM891634.1|FM891634 FM891634 Jatropha curcas emb...   165   8e-41

>gi|268526378|gb|FM891634.1|FM891634 FM891634 Jatropha curcas embryo
           56-70 (DAF) Jatropha curcas cDNA clone rjcaeb0_001971,
           mRNA sequence
          Length = 374

 Score =  165 bits (83), Expect = 8e-41
 Identities = 93/95 (97%), Gaps = 1/95 (1%)
 Strand = Plus / Plus

                                                                       
Query: 614 ccacccttgttgttgtggttttctaaaacttttactactgctgaaactatgctgaatgca 673
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 4   ccacccttgttgttgtggttt-ctaaaacttttactactgctgaaactatgctgaatgca 62

                                              
Query: 674 cgaacactaagggcatggatttcaaaagaacttgg 708
           |||||||||| ||||||||||||||||||||||||
Sbjct: 63  cgaacactaacggcatggatttcaaaagaacttgg 97